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54-2513-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5446601 [Map]; Strand: w
      • AT3G16060.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -742; Region: promoter
    Flanking Genome Sequence: 54-2513-1 - 5-prime edge 
    TGTTCGATTG CTCATTGAGA GAGATAATTA ATAAATATGG TGACACTTTC 
    TCTCTTATTC GTCTTAGTCA TATCATATAT CCATATCTCA TGTNGATTTG 
    TTATTTTGCT NTCCAGGGAG ACCACAANGA ATAACACCTC ACAAACGACT 
    AANGGCGCGA CACATTTGCT TTTGCAAAAT TCAAACTTGA AAGCTAGAAA 
    ATTAATAATA TATAGTCCTG CTCTATAATA NAATACTNTA AAATAGTAAA 
    ACAAAGCCAT NGAATTCAGA CAATCCAAAT NTTAATGCTA TCATGATCAC 
    TCTAAAAAAC AACTTTTACT TATACAAGCG TGAGAATAAT TTGGTCAAAA 
    AAGTTACCAT TACTTTTGAA TTCAAAAACG TTAATTATTG AGGTTTAGCT 
    AATATAACTT AATTTTTAGT GATATTATCA GATATAGTTG ACGTATGTAA 
    ATNTAACATT GNAGAAGTNC ATATTANTAA ATGTAATCCG AATGATTTTC 
    TAATGAATCA ATTGAATTTT ANAAAAAAGG NCCAAACTAT TTGNATAAAG 
    CNACTACNTG GTATTGATAT GACAAAAAAT NTGTNCTNNC NANAATACAT 
    ANNNTANAGT NAAANAACTN TGNNTNGGNN TTNNGGACTA TAACTANNNT 
    GNGATNNNNN AANNCNNNGG NNNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5446485 [Map]; Strand: w
      • AT3G16060.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -858; Region: promoter
    Flanking Genome Sequence: 54-2513-1 - 3-prime edge 
    ATCGAACAAC TCCAAATCAA AACATAGAGA AGATCATATC ATCAAGTTTA 
    TTTCGAAGCT TGAACATAAA TGGTCTTTTC CATACATATG ATATGGTCAG 
    ATCAGACGTC GTCATTCTCC ATTCATTTTG GGATCGCATG GGTCAATATG 
    AGCTGATATT TGTTTATATA AAATTCGCAT GTCGTTTTCA TACATCGCTT 
    CATATGTGTG TTTAATCGAT TTCCCACCAT TTATTTACTC GTGTCTAAAA 
    CTCAACAACA AATCGTTGGT ATTTTCAAAT CTACACCCAC ATGCAAAACA 
    TCACCACATT TTTAAAAAAA TGAATGTAAA ATTTTACCAA TCCAAAAAAA 
    ACGTTTTTAC AACTACGTGT TACTTTGAGT TTGAAGTTTC GTAATTAAAT 
    CTCTTANACA ATGCTTCGAT CCTTTGCCGT AGTTGCTTGA CGTTGTGTGT 
    ATTCACCACT TTCGTAGCCC TTCTTCATAG ACCTTGCTTC CTGATTTGAT 
    AGAAGACAAA TCAGTAAACG ATCACCACAT TTTTTGATGT TAAACAAATT 
    TTCTTTACCA TATGTCATAA AACCAACTGC ACCGTATAAA TCTCTGGATC 
    ATGCCCGCGT ACTCACATTA CGTAAGAAAT GAAAGTAAAC TACATCCTCC 
    TACAATCTTT TTGTTTNCCA AGCTGGCAAA CAATCCAAAA CCGGTGGAGG 
    NCATTTTTAC CATCATCCAT NTT

AT3G16060.1

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G16630.2); Has 9813 Blast hits to 9533 proteins in 306 species: Archae - 0; Bacteria - 4; Metazoa - 4228; Fungi - 1343; Plants - 1851; Viruses - 0; Other Eukaryotes - 2387 (source: NCBI BLink).
Link
InterPro Scan - TAIR