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54-2344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26583863 [Map]; Strand: c
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -319; Region: promoter
      • AT5G66610.2 - [+] show detail - DA1-related protein 7
        Distance: -911; Region: promoter
      • AT5G66610.1 - [+] show detail - DA1-related protein 7
        Distance: -917; Region: promoter
    Flanking Genome Sequence: 54-2344-1 - 5-prime edge 
    NGATCAGGNA CCGCGCTNNA NNTNCAGGGG TCANNCTTCN TGCGCNNNTC 
    ACNAGGNGAG GNCCAGNTGA CCNNNCNTNN NCGAANCTCT TTCCTTATAA 
    ATAAAAACTA GGTCTCTTAA TTACGCAGTC TCAACAACGC TTCTTCTAAT 
    TCTTCCTTGA GAGACAAATC AAAACTCTCT CTATTTCACC CTTTTTCATC 
    TTCTTCCTTT ANAGACAAAT NAAAACTCTC TCTTTATACA TAAACTCTGN 
    GGATTCCGAT CGATGATGAT GATCCAAGTA GAAGCCGACG ACGATGATCC 
    AAGCAAAAGC CGATGCAACA TCCGTAAGAT TTCANACTGA TACATAATAC 
    TTTTGATTAT CACAAGGTTT TCACAAATAT ATTTTTAAGT AAATNGNTTT 
    GATTTTTGTT TTTAATANAT TTTTTAGGGT TAAATTTTTA ATATGNGTAA 
    ACTATTAGAT ACATCCTCCC GTCCATAATA TGAGGTCCTT CAGAGGTGTT 
    TTAGGGNTTA ATATATTTTA CACATATAAA TTTTTAGCAC TNAATTTTTT 
    TTTGGGNTNG TAAACCAATT TTTTAAACTT NNTTNNNGGA GNNTTTNAGG 
    NAAAAATTAA AAAAAAAAAN TNAAATTTTT NAANNNTNCA NAAAANCTTT 
    GGGTTNTCCN AAGAATTTTN AAAATTNGGN NTAAAAAGGA AAANGGNTTN 
    CAAAAANGGG TNNANCAAAA TAACCTTTAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26583929 [Map]; Strand: c
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -385; Region: promoter
      • AT5G66610.2 - [+] show detail - DA1-related protein 7
        Distance: -845; Region: promoter
      • AT5G66610.1 - [+] show detail - DA1-related protein 7
        Distance: -851; Region: promoter
    Flanking Genome Sequence: 54-2344-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGAGATTTC CTTTTTTCCT TGGATGGCTT TTCATGGGTT TGTTTTCTTT 
    GTTTGTTACT GTGAGAGAAT CTGATGAGTT TAAGTAAAGT GAAGAATT

AT5G66607.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66610.1

Model type
Protein coding
Short Description
DA1-related protein 7
Computational Description
DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 2467 Blast hits to 1764 proteins in 148 species: Archae - 0; Bacteria - 16; Metazoa - 1946; Fungi - 65; Plants - 174; Viruses - 2; Other Eukaryotes - 264 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66610.2

Model type
Protein coding
Short Description
DA1-related protein 7
Computational Description
DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1).
Link
InterPro Scan - TAIR