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54-2205-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25588128 [Map]; Strand: c
      • AT5G63940.1 - [+] show detail - Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-2205-1 - 5-prime edge 
    TCTCTCAGTA GCAAATTTCC TCTCTCTCTC TCTGTCTCTC GTGTGTGTGT 
    GNGGGGTGNG GGGGAGGTAT AGCNCATAAG ATAATGNGCT AAGAGAANAA 
    GGCAAAANAC NTCTTTCTTG CANNAAAAGA AAACCCNNNT ATGANAGACN 
    NCACNAAAAN NTACCTNAAG NTAGGGGGGG GGGNGAGNNN TGTNNCAAAA 
    NATTGNGGAA GANCACCATN ACAACACGCG GNTNAAAAAA CCCCNCCNCC 
    TNATAAANAA AAAAAACNGG GGGTTCTCNA CACGGGAGGN ATCTATGGGN 
    CCCTCNNTCC ACCCNNTCNA AAAAAAAANN AGANNNNAAA AAGGGGGGGG 
    GGGGNCCCCT GTNAAGAAAA AAAACANACA ANAANTGGTT NCNGAAAAAA 
    AAAAAANNNG GNGGNNNAAA AAAAAAANCC CCGGGGGAAA AAAGNGGGGN 
    AAANNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25588244 [Map]; Strand: c
      • AT5G63940.1 - [+] show detail - Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-2205-1 - 3-prime edge 
    CTGAGAGATA CATTCAGTGA GTGTGTGTCT GTCACCGTGG AGGAGAAACG 
    GAAGGAGGAT AGATGAAACC GACCGGAGAA GGAGGAGGGG AAGTCGCCGG 
    AGCGGTGGCG GAAGGTTCGG CGTTGTTAAT TGTAGGAGTA AAGCCAGATG 
    AATGGAGTAG AGAGGTTCTT ACATGGTCTT TGGTGAATGT AGCGCGTCCT 
    GGAGATCGAA TCGTTGCTCT TCATGTTCTC GATTACTCTC TAGGTTTGTT 
    TAAACCCTCG ATCTGAGATT ATTCTGTTTG TTTATTTGTT TCTAATTTTG 
    ATATTTTTTG TTGGTTTTGG TTTGTGTAGA GGGCTCAACG TCGCTTATTT 
    CGTTGGTTAG GAATTTTGAT ACTATGCTTG GTGTTTATGA AAGCT

AT5G63940.1

Model type
Protein coding
Short Description
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Computational Description
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR