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54-2136-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1020912 [Map]; Strand: c
      • AT2G03350.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2136-1 - 5-prime edge 
    CCAATGACCT CACTGTGAGT GCTCCTTAAA TCGAATATCT TCTTCTTGCT 
    TTGTCTCTGA TGTTCTTGCA TGCGTTTCCT CTGTGAAATC GATGGCTTTT 
    TGTTACGTTT GGTGTAATGT GTTGATTAAA AGGCGATTCT TTTGTGAAAT 
    CTTGTACTTG TATGTTTCGA AATCGTAGAA GAATCACAGA TCTATGAAGA 
    TCTGAGATGG GTTTTACCAA TTGAAGATGA AAATTAGTTA ACATCATTAG 
    AATTGTTGAT ATATAGTCCT TATCTCAGAC CAATTTTGAT ATAAAGTTGA 
    GATTTTTAGC AATTTGATGT AGAAACAAGT TCCAATTTTT TACCAAATTG 
    AGATTTTTAG CATTAGAGAG TCTTTATACT AGTTAACTCA ACTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1020976 [Map]; Strand: c
      • AT2G03350.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2136-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGGTCATTGG TGATGTTTGA GAGCTCTTCT TTAGCTTTCT TAGAGATCCA 
    TGAACTTCCC ACTTTATAGC TCGTCACTTT CGTTAATGCC TTCTCCATTT 
    TCCTTCCCCT CGCTCTCTCT CTCTTTCTCT CTCTGTCTCT GATTCTCTGA 
    GTAAAAGACA AAGTGACAGA GCAGAGTGAT AGCTGCGGCG ACTCTCAATT 
    TTTCTTTCTC CATTGGCCAA AAACTGTTTT GAAGAAATAT GAAAGAACCG 
    GGGGCATTTA CGTAACTTCG TCATTTACTT TATTTTCCAA CTAAATTTCC 
    GTTTTGATGG CTAAATGTCA AATTAAGGAA ATGTTTAAAC AATGATGAAG 
    ACTCTCTAAC CGTCCAATGA ATTTTGAAAT TACTAAAATT CAAGTTTCCA 
    TTTTTCTTTG AAAACTTGAT TATTTGAAAA ATAGAATAAA AATTAAAATT 
    TGTTTATTTT TTTTTTNTAA NAAAAATGAA AAATANATGG ANAAAGTTTT 
    GCCGGANTTT NTTNTTAAAA AATTTAAANC GANTTACANC GGAACTCGTN 
    TCAGTCTCAT AAATCTAANC AAATATTCTT TTACGATCGA AGCAAAATCA 
    ACAGGAACAA TNGGTAAAAT NTGAAAATTT AATGGTAAAA AAAATGCATA 
    GTTNGCCAAC ATTAAAATTT GTTTGTTAAA GNGCATTTGN CTTTTTCTGA 
    TAAATGAAAT TATGGNCGGA AGGGAAAAAA

AT2G03350.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF538
Computational Description
Protein of unknown function, DUF538; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT3G08890.2); Has 544 Blast hits to 544 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 543; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR