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54-1709-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 791644 [Map]; Strand: c
      • AT3G03341.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -996; Region: promoter
      • AT3G03350.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G03350.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-1709-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AATACATACA TATATTACGA TGCAAACACC 
    GTATTTTAGA GCTACCCATA AAATTGCTTA CACAAACAAT AGCTGTCTGT 
    TTTCACAAAT TTATAACTCC AAACCCCACA ATTACAATAA CCAAGAGACA 
    CNTTAACCAG ATTTCGGTTT ACACTAGAAT TATATCCCCA TTGGTCATCT 
    GGCTCGGTCC GGTAGAGTTC CCCAGGCACA CCGGTTACAT GCATGTATTT 
    CGGCGGAGGT GGAGATGAAG ATGACCTGCT GCAGTATGTC TTTCTTGGTG 
    GTGGTGGCCG CAACGGAGTT GTAATTCCGG TATGTCCTCC GAGGTAAGAA 
    TCGGAATTGG CTTGATTAGT GAGATAGTGT AACACGAGGA ACATTGAGAA 
    AAAGACTAGA ATCAGAGGTT TAAGTTTCAT CATGATCATG ATTATTATGA 
    TTAATGGGAA ATGTCTTTTG ATTTCAAGAT TTGCAAAAAA TAACACATAT 
    AAAGCATACA TATATAAACG AAATGCATGT GCATGTAAAG TATATGCAGC 
    GTCATATCTC TACATCACCT ATATGCATTT GGTGGAGACC AGATCATACA 
    CATTAAAATG CAAAATTGTA AGGGTCTTCA GTTTTGAATA AGTCTTANAT 
    TGACGANGTC AATTTTTTTC TGTTTACCCA TTAGTACTAT ATTANGGTAT 
    AGGATTTTTT GTATGGACTG GC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 791649 [Map]; Strand: c
      • AT3G03350.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT3G03350.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-1709-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    ATTGTTTTCT ATATTATTAT TTTTTAAAAT CGTTCCTTTC GGGAAAAAAG 
    TGAAAAAAAA AAANGCTAAN CCGNGATAAA AAANGTCAAA TTTCCTTGTT 
    TTACCTTAGT TATNANCNAC CTTCAAAANA TTTCNATTTT CNCTCNCTTC 
    AGNGATCCNT TTAAACCAAN CCCNAANCCC AATTTTACTT AGTTAATTNG 
    ATAGGGGAGT TCTNGCNTGT NTAAATNGGG CCTCNCAGNC CCNCCTTGNT 
    NTCGGAAAAA TTNTNTGTNG ANCTGAAATN GAAATNGGAT TTTCGGTTAG 
    GTTTNCCNGG TNTTGAAATT AAAATNGATT TTTCGGTTAG GTTTACTNGG 
    TNTTGAAATT AAAATNGATT TTGGGTTCGG TTTACNCTGG TTTAAAAAAA 
    AAAACAAAAN CANTTGCCCC CAATGGGGAT TTCGGAAAGG AGNGCGTAAA 
    TTAAAAANGG CNTGATTTCC AAAGGGGTNC CCCCACANAA GNGNTTTNAC 
    NCNCTCAACG NTNATTTTGN GANAGNGGGA GTGAAATACA GCCTTCTGAT 
    TGGTTGAAAA ACTNTAAAAA AAGGGAAATA GTTTACATGT GGCTAGCTCC 
    ATATTAGTTT TTCGTNTTCT TCTNTCAATC TGATGAAAGG TGGTTGTTTT 
    TAGGNACAAT TNATTCTNTT NAAAACAATT TTGACGTNTN TCAATCCCAT 
    TTTAAATACA ATNGATTCTN TTN

AT3G03341.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03350.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03330.1); Has 56644 Blast hits to 56586 proteins in 3128 species: Archae - 370; Bacteria - 40229; Metazoa - 3300; Fungi - 2140; Plants - 1046; Viruses - 2; Other Eukaryotes - 9557 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G03350.2

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03330.1).
Link
InterPro Scan - TAIR