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54-1406-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10937518 [Map]; Strand: w
      • AT4G20240.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 27
        Distance: -3306; Region: intergenic
      • AT4G20250.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 472; Region: intergenic
    Flanking Genome Sequence: 54-1406-1 - 5-prime edge 
    CTCAACAACC CCCACGTTCT AGCATAACCA TTATGTTCGT ATTGGTTGAA 
    AAAATGAGAG TTTTTATCTA CTTCCAAATG TGCTGATTAT ACATCAGTCC 
    TAGCTAAGAT AACATTTAAT TTCATCTTTT TCTTAAACCG GATTTTCATT 
    GATCAATATT TTGTTTCTTT AACATATGGA TTACCAGCGT TTTTGGATTT 
    CCATGAATAA AGGATAACTT GGACAGTACT GAAGCTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10937402 [Map]; Strand: w
      • AT4G20240.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 27
        Distance: -3190; Region: intergenic
      • AT4G20250.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 588; Region: intergenic
    Flanking Genome Sequence: 54-1406-1 - 3-prime edge 
    TTGTTGAGGC CCACAGACTT CCAAATATTG TGAGCGTTAG AGAAGCCCAT 
    AGAGGACTAT TATATGGACT ACTGTTTATC CCTATGCTTT GCCTCTATTT 
    TCGAGCGGAT GATATGATCC AAACCATATC AAAGATCCAA ATAATCGATA 
    CGAACGTTAT TATGTTCATA AATCAATGTT AATAGTAACA CATATAAATA 
    TCTACCAACC TCACCTATTT ATATTATTGC ATATTCTTTT AACGTTCAAC 
    AAAGTAGTCT CCATGCTCAT CTCGATGTAT TTTGCCATTA TGTTCAAAAA 
    CTTGTCAATC AGTTCTTGAC TTGGTTACAC AAAAAATGAT ATTATTCTCA 
    TATATCTAAA CATCCATAAG CT

AT4G20240.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily A, polypeptide 27
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily A, polypeptide 27" (CYP71A27); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 20 (TAIR:AT4G13310.1); Has 27160 Blast hits to 26983 proteins in 1467 species: Archae - 44; Bacteria - 2315; Metazoa - 10770; Fungi - 4604; Plants - 8614; Viruses - 3; Other Eukaryotes - 810 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20250.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR