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54-1402-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26535029 [Map]; Strand: c
      • AT5G66450.2 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G66450.1 - [+] show detail - Phosphatidic acid phosphatase (PAP2) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-1402-1 - 3-prime edge 
    ACAGGCCGAT TTAGTAAAAA CCAATGCTCG CAGAGACGGT GAAGAACGAT 
    TTCAAGCGCT TGAGCAAGAG GCTTTCATCA ATAATTCGTC TCCGGAGCTC 
    CAGAACGAGT TGGTATCCGA CGCCGGAGGT GGGATTGAAG CAATCGCTAA 
    TCGTCTGGTT GGTATTCGAA TTCCCTGATG CACACAACCT GTTTGATGTA 
    ATGCATATTT CTATGAAAAC ACTAAGCAAA GCTTTTTCCT TTCTTTATAC 
    TGCATTTTTG TCAAATGGCA GAGCAAATGG ATTGTAGCAG CTCTGTTTGG 
    ATCCGTTCTG CTTCTACGAC ATGATGGTGC AGCTTTGTGG GCTGTGATTG 
    GATCGGTTTC AAATTCCGTG CTCTCAGTAG CTTTGAAACG TATACTTAAC 
    CAAGAGAGAC TGTTGCTAC

AT5G66450.1

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66450.2

Model type
Protein coding
Short Description
Phosphatidic acid phosphatase (PAP2) family protein
Computational Description
Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: Phosphatidic acid phosphatase (PAP2) family protein (TAIR:AT3G50920.1); Has 319 Blast hits to 319 proteins in 143 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 89; Plants - 87; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR