1. Home
  2. Mutant Lines
  3. 54-1399-1

54-1399-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26580390 [Map]; Strand: w
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -1564; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 3041; Region: intergenic
    Flanking Genome Sequence: 54-1399-1 - 5-prime edge 
    TCAGCAGAGC CTCTGGTTCT TGGGCCTTTG GTGCTGGGGC CTTTTGGGTC 
    TTTAGAATCC ATCGTCACAA TTCAAGCCTC ATTAGTCAAT TCAACGTCCT 
    ACGCAATGTT CATTTTTTTT TTTTTTTTTT TNNAAANGGG NCCNAANNNT 
    TNTTTTTTTT TAAAAAAAAA AAANNTTTNC CNAAAAACCC NAAANNAAAN 
    TTTTTTNTTN CCCCTTTTAA AAAAAAAAGG GGNAAAAACC NGGNAANCCC 
    CCCNGGGNCC GNAANCCCCN GNNNNNTTTN NAANNNNNNA AAAAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26580274 [Map]; Strand: w
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -1448; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 3157; Region: intergenic
    Flanking Genome Sequence: 54-1399-1 - 3-prime edge 
    TCTGCTGATG TCAAAACCCC TTCATTTTGT TTTTCCTCTG GATATAAATC 
    CACAAAAGTT ATATGACATC AATCCGACAA AGTTTAAAAA CAATCGCATT 
    TCTTGAATAT GGCTAAGATA ACATATCTCG GATATTGTGA ATATATGTCC 
    GACGTTATTC AAAATTCGAG GCGATTAGTG ATAAGCTCCA AAAACAAGGT 
    ACGTATATGT TAGTTTACCA TTACCAATAC TCTCTTTGTT TTTTTTTACC 
    ATAAACTCTT ACTATTACTC ATCAAACTTA TAAACACTCG CAAAATATTC 
    ATATACATGC AGATGCAGGC CCAATTCCAA ATAATAATAA AAAATCAAAG 
    ATTTCAAAAC CAAAATCGGA TCGGATACGT AACGTTATAG TATACTATCT 
    TTTTTTCTAT AACGACTAGT TGAAGCGTAT GACGACAATA TAGAGAAGAC 
    CTGGATTGTC CCACACCTTT TTTTATGCAT TGATCTTCGG AGAAACACTA 
    AAGAAAATAA AAAACTTTAT GTTTACACAT TTACAATTTT ATAATGGGTT 
    CGTGTGTGGA TTCTTTGACA AACGAAAGTC CACTTCTCAC ACAAAAACAA 
    ATTCTCCGGA CATCGCATTT GTCAATTTTT CTCTCCAAAA AAAAAACNCN 
    TTAAACAAGT CANAANAACC CAAAANATAC CATNTTTCCA AAAATTNGAN 
    GTTNCCTTTT TAACC

AT5G66600.4

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
Link
InterPro Scan - TAIR

AT5G66607.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR