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54-1397-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26580390 [Map]; Strand: w
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -1564; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 3041; Region: intergenic
    Flanking Genome Sequence: 54-1397-2 - 5-prime edge 
    TCAGCAGAGC CTCTGGTTCT TGGGCCTTTG GTGCTGGGGC CTTTTGGGTC 
    TTTAGAATCC ATCGTCACAA TTCAAGCCTC ATTAGTCAAT TCAACGTCCT 
    ACGCAATGTT CATTTTTTTT TTTTTTTTTT TNAAAANNGG ANCNTTTNTT 
    TNTTTNTANA NNNAANAAAA NGTTTTTTNN CNAAAAAGCC ANAANNANNN 
    TTTTTAAACA ANACCATTTA AANNTTTGGG GGGGAAAANN ANGGTTNNCT 
    NAGGGNAAAA AACCNTTGNC CNCAANAANA ATTGNCNNCN AANAAAAAAA 
    ANNNTNNGGG NGGNNGGGTC CNNNNTNNGG GGGGGGNGGG GGGNNTNTTT 
    TTTTTTTNAA AAANTTTTTN NCCCCCNCCN AAANAGGGGG NTTACNNCAN 
    AAAAAAAAAA AAANGNCNNT TTTGAAAAAA AAAAAAAAAA ANTNNNGNTN 
    NTTTTNTNTT NNGGGGGGGG GGGGNTTTTN AAAAAAAAAA AAAANNNGNN 
    ANCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26580274 [Map]; Strand: w
      • AT5G66600.4 - [+] show detail - Protein of unknown function, DUF547
        Distance: -1448; Region: intergenic
      • AT5G66607.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 3157; Region: intergenic
    Flanking Genome Sequence: 54-1397-2 - 3-prime edge 
    TCTGCTGATG TCAAAACCCC TTCATTTTGT TTTTCCTCTG GATATAAATC 
    CACAAAAGTT ATATGACATC AATCCGACAA AGTTTAAAAA CAATCGCATT 
    TCTTGAATAT GGCCTAAGAT AACATATCTC GGATATTGTG AATATATGTC 
    CGACGTTATT CAAAATTCGA GGCGATTAGT GATAAGCNCC AAAAACAAGG 
    TACGTATATG TTAGTTTACC ATTACCAATA CTCTCTTTGT TTTTTTTT

AT5G66600.4

Model type
Protein coding
Short Description
Protein of unknown function, DUF547
Computational Description
Protein of unknown function, DUF547; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT2G23700.1).
Link
InterPro Scan - TAIR

AT5G66607.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR