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Mutant Lines
54-1194-1

54-1194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30353367 [Map]; Strand: c
- AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
  Distance: -1159; Region: intergenic
- AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -1748; Region: intergenic

CTCCCAACAA TCTATTTCCA CCACACGCAT TAATACATTC TCATGATTTA 
TTGTTTTGTT TCGATTATAT CTGCGTTCTC ACTGTACCAA ATTTTTATTC 
TATGACATAA TGTGATTTAA CTTTGAAGGG AATGGACGAA ATTTAAATGA 
CTATCTTAGT CTTAGGAGGN ATATATTCTC CGGATATATA GACCTCTTAT 
CTATATCTAC ACATAGTTTT TTAATCTAAA CCGAGACCAC TAGCTCACTC 
CTCTACTTAT TCTATAAAAC TTAGAAAAGG GTATGTATAC TTGGGCATAA 
GTTATAAAAG CGAATAAGGT TCAAGAAACT TATACCTTAG AGAAATAATT 
ATAATTAAAT CTTGTTCCAA GACACTTCAA TTCATAGTCA TACNATTGTG 
AGGACAAAGC ANTNAATTAN NGNNTTAATT TTGATTCTAA AGAGTTNTGG 
ATAGAAAAGG AATAACCGTT AAAAGTNTAC ANATTATATG CAANGAGTCA 
TTCGAAAGAA TTTANTNTNG AGATGANCNC NCAAGNGANT CCAAACNNTA 
TGATAGAATT ACATNTAAAN GAAAANGNNA TTGGCNTGCN AAANNNGNTT 
CNCCNNTNTG NNGTNNNAAN NAGANTTTTT NTTTTGNGNN NNNNTNAACN 
NAAANNAAAA AAGNNNNNNN ANNNNNNCNN CCCGCNCCCN TTNAGAAGNG

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30353483 [Map]; Strand: c
  - AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
    Distance: -1275; Region: intergenic
  - AT1G80770.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Distance: -1632; Region: intergenic
Flanking Genome Sequence: 54-1194-1 - 3-prime edge
```
GTTGGGAGTG GAGGAACAAA TCANGACCGT TTGAAGGATG TGAAGCGACT 
GTTTGTTCTA AAGCCCCACG TCACATCGCA GGGCATCACA GACATAGTAA 
CTGTGAGATT TCATACATTA TTAATTTGGA TGATTTTAGT GAATCCATTT 
ACTTCGTTGT AAAAAGATTA CTCAAGTCTG ATTAGTTACT TTTCTAAACA 
CAATGCTTGT AATATATTCG ACAATTCTAT ATAGCATAAT TTTTATGTGC 
ATGTTAATAA CAACATTAGT GACTATAAAT GATAGATGGT CAAA
```

AT1G80760.1

Model type: Protein coding
Short Description: NOD26-like intrinsic protein 6;1
Curator Summary: Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description: NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80770.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: pigment defective 318 (PDE318); FUNCTIONS IN: ferrous iron transmembrane transporter activity, GTP binding; INVOLVED IN: ferrous iron transport; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), Ferrous iron transport protein B, N-terminal (InterPro:IPR011619); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 11067 Blast hits to 11052 proteins in 2859 species: Archae - 320; Bacteria - 7505; Metazoa - 379; Fungi - 348; Plants - 242; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).
Link: InterPro Scan - TAIR