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54-0421-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26751460 [Map]; Strand: w
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 211; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 2050; Region: intergenic
    Flanking Genome Sequence: 54-0421-1 - 5-prime edge 
    TTTCTAACCC CAACCATGTT ACAATATCGA GTTACGTGAA ACCATGCATT 
    ATGTAACGAA TATAAATCTA AACACAAGAT TAACAAAAGA CACATGTTGA 
    AATGTAAACA ATTCCAGGAC ATATGTGTAA ATTACCAATA GTGACTTAAG 
    CTCTTCGGAG TAAATCCGTA AAACAACAAT GTTTTGGTTA ATGGTTGATT 
    GTATTACTGA AAACTAAATG CTTGACATTA AACCTTTTAC AAAAACAAAG 
    CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26751344 [Map]; Strand: w
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 95; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 2166; Region: intergenic
    Flanking Genome Sequence: 54-0421-1 - 3-prime edge 
    GTTAGAAATA ACAACTTTGC GTTCGAACGA AGCCGTCTTT GCCACAGTTT 
    GCGTGACCCA TCAACGTTCG TTTGTGTTTG TTTGGGAAAG CCGTCACACG 
    TGCGTTTGTG ATCCTAAATT AAATTATATA AAATCTGCTC CACATACACT 
    AAATCTACTA AATAACCCAT TAAACTGAAG CAAAACATCA GTAATCAATA 
    TACAATTATA TCACCATTAC TATGATTCCA ATGTAAATTT GTAATGTGTT 
    TCATGACCGA GAAACCCATT CAGCAAGTTT TTCGAATTGT TCGACGAGCA 
    TAGGCGAGAG TTTCTTAACC GGTTTCCTCT CCTTTTCCGG TCGAAAATCA 
    AACCCAAGCG CGTCCGAGAC TTCTTCGGAG CTCCACCCGG ATTTACGGAG 
    CGACTCTGAG ATCCGACCCG CTTTTAATAG AAGCACATCA AGAACAGTTT 
    GATTATCGAT AATTACCATT TCGCCCTCAA AGAAACCCGA TGCTGACACG 
    TGGATAATCT CATCAATATC GGATTCGCTC CACCCGCCTC TTCTTAAAAC 
    CGAACCGATC CGGTTTACGT ACTGGTTCAC CCATTTCGGA GTCTCTGTTT 
    TGGGAAGGTC CGGCGATGAA GAAGACGACG ATGATGTGGA GGCAGAGTTT 
    CGCCGGCAAC GATCAACCGN CGCGTCACTN CNAAACTCAA CCCATCTNGA 
    CTTACCCCGC ACCATTAGCC CGACCCAAAT

AT5G67020.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67030.1

Model type
Protein coding
Short Description
zeaxanthin epoxidase (ZEP) (ABA1)
Curator Summary
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational Description
ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6841 Blast hits to 6837 proteins in 1107 species: Archae - 14; Bacteria - 3761; Metazoa - 2; Fungi - 1599; Plants - 605; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR