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Mutant Lines
54-0177-1

54-0177-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 9903836 [Map]; Strand: c
- AT2G23270.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 0; Region: exon1 (3UTR)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT CGGTACGTTA 
TTGAAACTCA TTAAAAACAT GAATATCCAG TTATTCATTC ACATAATCAG 
AATAATAAAT TAATTACAAT ATATATTACA TTGTACATTA TTATCAAATG 
AATTTCAATA AGTTAACAAA AGAATATTCC TACAGAGAAC AAATGAGGTT 
CTTCCAATTC TTGATTTTCC CAAGTTCTAA GCATAAAAAG AAAAATCTGA 
ATAATTAATC TGAAAAAAAA CTAAACAAAG CAATCAATTT CCGGAGCTAG 
ACCAAAGCAG CCACATTAAC TGGTTCCGTC GGGAACTTAG TGACCGGGTC 
CACTCGTGCT GGGACCTGAA TGCTTACCAT ATTCAAGCGT CTCAGTCCGG 
TCCACGAACC GATGACCCTC ACCACCAGAG CTAGGACCCG ACTCCTTAAT 
CGCCCCAAGT GACAAACCAT CGAAGAACTT AGCCACGAGG TTCTCTTCAG 
CCTTCGTTAA ACCCAAAGGA CGAGCCTCCA CCACAAAATT CGAACTCACC 
AACATGAAAA ACAGAAACGA ACCCAAAACA ACTTTGTTCA TCATCATTTT 
CTTTGAGTGG TATTTTTGAG TAGTAAAAAC AAAAATGTTT TTTATTTTAT 
TTTTCTTGTG TTCCCTAATT TATGAGATGA CTAAATTTGT TGTGAGTAGT 
TTGTGGACTT GGGAGTTAGA ATATATAGTA AAGTGAAGAG CCTGAAGAAG 
AAGAAAAGTT TGN

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 9903914 [Map]; Strand: c
  - AT2G23270.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 69; Region: intergenic
  - AT2G23290.1 - [+] show detail - myb domain protein 70
    Distance: 873; Region: intergenic
Flanking Genome Sequence: 54-0177-1 - 3-prime edge
```
AACATAGTTA AGCTCCAAAT CCACAAAGCA AAAAGAAGCA GACTTAACTT 
TAACCTTCTT CTGAGTGATA ATCACCTAAG CT
```

AT2G23270.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G23290.1

Model type: Protein coding
Short Description: myb domain protein 70
Curator Summary: Member of the R2R3 factor gene family.
Computational Description: myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink).
Link: InterPro Scan - TAIR