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54-0083-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 12144906 [Map]; Strand: w
      • AT5G32511.1 - [+] show detail - transposable element gene
        Distance: -249; Region: promoter
    Flanking Genome Sequence: 54-0083-3 - 5-prime edge 
    GTTTTNAGCC CATTTNGAAG AAGACGGTNG CGGTTTGAGG AGCGGTCGAN 
    TNAAGAGACN AATGGAGGCN CANTGAATGG CGAGGTCGAG TGAACGGCGA 
    GAAGCTCCAG CAGAAGTCGA GTTGGCTCNC GGAGAACGAG AGANAGAAAC 
    TCTGGCCGTT TGTCGAAAAT CAAATGAAGA GCTTCTTTGT CCCAATTGCG 
    ATGTGGTCGA NTGAATGGTG GAAGCGGANA TGAGGTCNAG TAGCTGGTCG 
    NGTATGAAGG ANACGACNAT GANACGGTGA AGCTTCCGGC GAAGTNTAGG 
    GCGGAGTGGT CNANTGAACG TNNNGTGGTG AGAANGAAGA NAACGACGAG 
    GGTGGAGTGC TATCNTCGNG TGANGGAGAG TGAATNANAA GGCGGAGGCG 
    TGAGCGGTGA GAGCTGGNAC NGCGAGGTCN ANTAANCGGC GGATGGAGAA 
    GANGGCGTTG CNCTCGAGTG AATGGGACGC GGTGAGAGAG ATGACCAAGT 
    GATGTTTGGT CCGANTTAGA GGGAGGGCGA CNAATCAGCT ATNGGATTGG 
    TNTACCCCAG ATGGGGANAA ATCCATTNAA CANTTCAGGT CCNATGTGAT 
    GGTGCNGGNC AAGTTNTTTG GATNAGGAAN ANNGATTATN AACNNTTGGT 
    CGAANNNAAA ANACNNTAAG NTNAAGNGAN TTTTTNTTTG NCGNAAATTT 
    TTNGGNAAGG GGANAAAAAT TNTTNCCNGG GGGGTAAAAG NTNNNNTTAA 
    TATNCCNNGG GGGGGAANGG AAGGAANAAT TTTACGNTTT TTTTCACNCC 
    NCTGNGGAAC TNANGNTAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1006599 [Map]; Strand: c
      • AT2G03310.1 - [+] show detail - unknown protein; Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; B...
        Distance: 0; Region: intron1 (CDS)
      • AT2G03320.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -783; Region: promoter
    Flanking Genome Sequence: 54-0083-3 - 3-prime edge 
    TAGGTGCCTT TATTCTCTAC AAAATCACGT AATTTCCAAT AAAAGAAGTT 
    TCTTAAGATT ACTATAGCTC TATAAGCTCA GAATTAGTTA ACACAAACCT 
    GATCTTTCTC TCTGAGGAGA AGAAGCAGAA ATCTCAGTTT CTCTTCATGT 
    AGCCGTCTCC ACCATCTCAC GAGCTTCACA TAAACAAGGC TCAAGACCAA 
    CGAGAAGCCT CCAATGATTG TTAATGACCA AAATACCCTT TTACGAGTTA 
    GGTAACTACA ACGCACCCTT TCGACGGCCT GAAAGATGCA CACTGAGTTC 
    TTGATTAATC GCTTCTTGGT AGTCTCAATC ACTCGCCACG GA

AT2G03310.1

Model type
Protein coding
Computational Description
unknown protein; Has 17 Blast hits to 17 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03320.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G32511.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR