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54-0038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26584773 [Map]; Strand: c
      • AT5G66610.2 - [+] show detail - DA1-related protein 7
        Distance: -1; Region: promoter
      • AT5G66610.1 - [+] show detail - DA1-related protein 7
        Distance: -7; Region: promoter
    Flanking Genome Sequence: 54-0038-1 - 5-prime edge 
    CTCAAAAGGT TCAAATGCCA TGTCTTTGGG GGGTTTCCAC AACTGGAGAA 
    TGGGAGTGAG CAAATGAGGA AAGATTTGAG AAAGAGGAGT AAACGCAGGC 
    ACATGGAGAA GAAAGTCAAT TAAAAAAACA CNTTGTGGTC CAGCTGGTTT 
    TGCCACGTGA CGTATATCTT AATTAAAGTC AATTAACAAT AATTTTGGTT 
    TACAGAAGTT ACAAGTGAAC CTTTTTCAAT CTTGCTGATT TGTGCTGCAA 
    AGATTGATTT TGCTTCTCTA TAATTGAACT GTATTATTTT TGATTCAAGA 
    TCAGAAGGGC ATGAAGAGTT TGATGATTCT CAGGTTACTC TTCTTTGGTT 
    TTGAAGTATA CTACTACTTC CTGATTTTTC TAGCACAATG TAACTGGTTT 
    AGTTCGCAGG AAAGTCTTGG ACAATCTTCT ATTATAAAAG AAGCAAAACA 
    TAAGGACATA TGGAACCTCT TTAGAGAAGC TCAAGAGAGT AAAGAAATTT 
    GGTTGCTGTT GGTTTCGGTT TCATATGTGA AAGTTAACTC ACCCGAATGT 
    ATTGTTGTGT ATTTAGATAT CCTTATCTTA AACAAGCAAC TGTTAGCTGC 
    AGCTGAGGAG TTAGAGAAGC TAAAGAATGA GAAAGATGAA TTGCTAGTAG 
    AGAGGATTAA CCAATTGGAG GCAGAAAGTC AATCAATAAA GTTTTCATTT 
    TTCGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26584889 [Map]; Strand: c
      • AT5G66610.2 - [+] show detail - DA1-related protein 7
        Distance: 0; Region: intron1 (5UTR)
      • AT5G66610.1 - [+] show detail - DA1-related protein 7
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 54-0038-1 - 3-prime edge 
    CTTTTGAGTC ATCATCAGCG TATTCATTCA CACAGACGAT TTAGGTCAGC 
    ATTTATCTTC TTTAATTCTT ACTTTCACTT GATCCTTTTT ATCTCTCCGC 
    GTCGTTAATT GTGAAAGTGG AGAGCTTTAC ATAATTCCCC AAAGTAAAAA 
    GCT

AT5G66610.1

Model type
Protein coding
Short Description
DA1-related protein 7
Computational Description
DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 2467 Blast hits to 1764 proteins in 148 species: Archae - 0; Bacteria - 16; Metazoa - 1946; Fungi - 65; Plants - 174; Viruses - 2; Other Eukaryotes - 264 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66610.2

Model type
Protein coding
Short Description
DA1-related protein 7
Computational Description
DA1-related protein 7 (DAR7); FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1).
Link
InterPro Scan - TAIR