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53-4563-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22816029 [Map]; Strand: c
      • AT5G56330.1 - [+] show detail - alpha carbonic anhydrase 8
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 53-4563-1 - 5-prime edge 
    CCTTGCGCTT ATTGACTGCT TGAAGCGGCC TGGCATTTGA ATCTGAAGCC 
    TGTAAAATAT TTTCAAAAAC TGAAAAGTAA GAAATCAATT GGATGATAAA 
    ACATGATGGT CTTATCTTGA ATATTATATA GACCATAAGT AGTCTCATCT 
    ATGCTCTACA GACTCATATC TTGAGAAATA TGCAATTCAG ATATTCATAT 
    AAGTATTAAT ATGATAGTTT GCTAATATTG TTATACTGTA TAATAAATCA 
    GAAAAAGAAG AAAAAAACTT ACATCGTGTA CAGCCACACG GAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22816105 [Map]; Strand: c
      • AT5G56330.1 - [+] show detail - alpha carbonic anhydrase 8
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 53-4563-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TATTTATACA AACCAAAGGT TAAGTTAATG AAGAAATACT GTAATATAAG 
    TTCTTACTAG TAATCTTTAA TTCTTTATAT ATGTACATTA TGAATTGTAC 
    ACTAAAATGA TGTTTTTAGG GATAAACTGA TGACTTGGTT TTGTTATTTA 
    AAAATAGTCT CCCACTCGTG TTATATAAAA TGGTTTTTAT GTTACTTATT 
    TATAAGCAAA CCCTCTTTAC CTAAAGAAGG GTATGAAACA ACACAGTCTC 
    AATTTCAATT CTCTTGGTAA GTGCTAACTA TTAGTGTTAT GTTAGGGATC 
    AAATTAGTTT CAATTCTCTC AGATTCAGTT TATGTGGTAG TAGGGCACAT 
    AAGTTAATGA GCGCATGAAA AAACCGAGAA TTGATCACAC AAAATTTCTA 
    GCTCATACAT CTTCATTAGC CTTTTGTTTA GAGCAATCCT CTTCTGTCTA 
    AACAGTGAAT ATGTGAAGTC ATGTGTAGAA ACCACCATTA TTTAAAGACG 
    AGTCAAAATT TATTGGAAAT TTTTCACAAA CGAAGCTAAA ACTACAAAAA 
    AAAAAAAAAA ANNAANNTCC CCNGGGTTTN AAAANTTNCC CAANCCCATT 
    TNGGGGGGGG GAACCCCNAC CCCCCCGGGA AAAAACAANN NNNANTTTTT 
    TNNGGNNTTN NAANCCNNCN NGGGGGNCCA NTTTTNGGGN AAAAAAAAAA 
    AAAAA

AT5G56330.1

Model type
Protein coding
Short Description
alpha carbonic anhydrase 8
Computational Description
alpha carbonic anhydrase 8 (ACA8); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process, cyanate metabolic process; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 5 (TAIR:AT1G08065.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR