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53-4452-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5332018 [Map]; Strand: c
      • AT1G15520.1 - [+] show detail - pleiotropic drug resistance 12
        Distance: 0; Region: exon22 (CDS)
    Flanking Genome Sequence: 53-4452-1 - 5-prime edge 
    CTTGGGTGTG GTTGCCGCCA TGAACGTCAT CTTTCCTTTG CTCTTTGCCG 
    TTATCTTTGC TATCGGAATC AAGAGTTTCA ATTTCCAAAA ACGATAGACA 
    GTTTATAGTT TTGCATTCTA TTTCATGTAA CACAAATAAA AAGAGACTTT 
    TTGTTTATAT GCTATTCTTT CTATTTTTGT AATGCCGTAT TGATATTAAT 
    AAAAGGATGA TCAACAACAC TGGATTAGAA TGAATCCTCT ACCTAATGAT 
    GTTACATACA GAGCAACTCC TATTGTATGA TAAACGTTAC AGACAAAACA 
    AAGCCACATA TAATCCAAGT TTCCTGTGTA ATAAACTTAA CAATACCTTG 
    ATGTGTCTAT ATTCCTTTTG TATCCATTCT AATCTCCACA TGAACATTCT 
    CCATCTTTAA AGTGGTGGAA ATGCTCAGCA TCTCTTACTG AGATTTCTCT 
    TCTTACTGTT TTGGAGATGA ACTTTACTGT ATCATGGCAA TTTTCACACA 
    TACTGAGATT CTTTGTTACC CAAATTGGCA TTCCTGGGAC CGTGTTGATC 
    AGACCAAATG CAATGGCCTT TCTCTCGCTA TGTCCACAGA ATATCTCATC 
    TCTCGAAATC TCTGTCTCAT CCATAGAACT CGATTCTGAA CTTTTAGTAA 
    GCCCAACTTC ACTCATTTTC TCATAGAACC CCTCTAAACA GTGGTGATCT 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5332083 [Map]; Strand: c
      • AT1G15520.1 - [+] show detail - pleiotropic drug resistance 12
        Distance: 0; Region: exon22 (CDS)
    Flanking Genome Sequence: 53-4452-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGT 
    GCACCCAAGA AACCTTCTCT ATATCCATAG AATTCTCTAA TGAATTGCTT 
    CACACTCATA TTACTATCTG CCATAGGTTC TGTAATATCA CCGAACTGTG 
    ATGCGATTAA TCCATACAAT GTCCATGCAA CTGGGCAAAG CCAGTAGTAC 
    CATTCCCA

AT1G15520.1

Model type
Protein coding
Short Description
pleiotropic drug resistance 12
Curator Summary
ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.
Computational Description
pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink).
Link
InterPro Scan - TAIR