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53-4385-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216556 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-4385-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT TCTTTACAGT GAACCAACAT CGGCAAATAA 
    AATATAATAT GGTAAGAAAT GTGAAGAAAG TCTCATGTCT TTTTGCATTT 
    TCATTAAAAT AATGTACCAC TTCTGTTTTA TGATGTTATC TTTGTAATGC 
    AGCTGCGCAT ACCAACTAAG GTCATAACGA AGTATGGCTT ACACTTCCCT 
    GAGTTCATCA ATTTGATTGA TCCACTCGAC CNAACNCGGG NCGCNAGACC 
    ACCCGCGCNG GNCGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216613 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-4385-1 - 3-prime edge 
    GGTTCATGTG ATTATCCAGA TATTGTCTGT CGTGCTCTCC AGAAGAACCT 
    ATCAAAATTT ATACGCAAGA AAATAAAAAG ACAGTGATGC TCTCAGTCTC 
    AGTTAACTTC ACAAGACAAA AGTTTCTATT ATACCTTTCT TTTTTTTCTC 
    TGTTTTGACT CCTCTCCATC TTTCTTTCTC AACATCAGCA TGATCATCGT 
    CACCATAATC TTGATCATCA TCATCATCAT CATCATCATC ATCATCATCA 
    TCATCAATAA CTATGATATC TTCACTAGAT GTATCTTCCT CAACATAATC 
    TTGAACATCA TTAATATCAT CATTATCAGC ATCATCAAGA GCTGTAATAT 
    CTTCACTAGA TGTATCTTCC TCATTATAAT CTTGAACATC ACTAATATCA 
    TCATCATCAA GAACTATGAA ATTTTCACTA GATTTAACTT CTTCCCCATA 
    ATCTTGATCA TCATTAAAAC CATCATCATT GTCATCAAGA ACCGTGATTT 
    GCACTGAACT TCTAAGCCTT TTACACGTTG CACGACCATA GATACAGAAA 
    TTGAAACACC AAGAGCCATC AAACTCAAAT TCTAAGAACT CTCCACCTTT 
    CAAATCTTCG TCCTTGACTA TCGTCTTCCA CCATTAAACC ATAACAAATC 
    TCTCACTATC ACCACAAAAC TTCCTAAACG CCACTTTCCA GATGTTTNCA 
    TANATGCTTC TA

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR