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53-4357-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25886572 [Map]; Strand: w
      • AT5G64740.1 - [+] show detail - cellulose synthase 6
        Distance: 0; Region: exon13 (3UTR)
    Flanking Genome Sequence: 53-4357-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG TGAGAGAAAA AAGATTTGTC AAATTATTCT
    TTAATTGAAT ATTTCTGATC TCTTTTGAAT ATTACAGAAG AGCATTTTCA
    ATCTGTAATC TTTTATGATT AAAGAACTTT GATTTATTTT CACTAATTTC
    CCTATCTTAT TTCTTGTTTG AAAAATTAAT TTACTCGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25886558 [Map]; Strand: w
      • AT5G64740.1 - [+] show detail - cellulose synthase 6
        Distance: 0; Region: exon13 (3UTR)
    Flanking Genome Sequence: 53-4357-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGA 
    ACAAAACAAA TAGACAACAA CTTTCTTCTT CATCTCTATA TCTACAACAC
    ATTCTTGCAA AAATAACAAT TCTCGTAACA AAATTAAATC TTCTTTTTCT
    TTTCATTTTT CATCATCTAA TGAACACAAT GAAGGAGTCT TTTAGAGGTA
    AAACAATATC TCTCTTACCT CTCTTTGATC CGTGGGAATT AAACCTTTTT
    CACCAACCCA TCCACCGGTC AATCGAATCA CAAGCAGTCT AAACCACAGA
    TCTCGAGAAT AGGACCGCCT TTCGCCACAA ACGGATTAAC CCGGACCCAA
    AGAAGTGTAA GAATCGAGGC CAGGAGGATG GACCAGACGA CAATAATGGT
    TGGCATTCTA TCTTGTTTCC CAAGCAAACC TTTAAGGAAC GGGTAAAGAT
    GAATGATGAC CCAAAGTGCA AAGAACAGTC TTCCGAAAAG CGGTCCCCAC
    GAGTCGTATC CATTGCTGAT GGCATCAGAG ACTCCGACTA TGACTCCAAT
    GACGTTTATG ATGAGTAGAG TCATTGGAGG GATGAGAAGT GAAGTCCATT
    TGAAGAGGTA AAGGTCAGAG AACTCTCCAT CATCAGCTGC TTTTGATGTG
    ACTGTGAAGT TAGTGTCGAC ACCAGCAAGA ACCTTGAGGA GACCTTGGAA
    GAGAGCAAAC AGATGCGCAG AAACACCTNC AATGACCCAA ACTGTTCGTT
    TCTNCACCAA T

AT5G64740.1

Model type
Protein coding
Short Description
cellulose synthase 6
Curator Summary
Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational Description
cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR