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53-4049-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 11104744 [Map]; Strand: c
      • AT3G29130.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -838; Region: promoter
      • AT3G29130.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR0193...
        Distance: -892; Region: promoter
    Flanking Genome Sequence: 53-4049-1 - 5-prime edge 
    ACTACCATAA TCATTCATCT CTTTGTCTCT TTAAATCTAT CATTTTTTTT 
    CTTTTTGCCC CAAAATACGA CCATAAAGGT TATATCTATC TGATTTCCAA 
    TCTCCAATTT GAGATTTGAA AATTGCAGTT TGAAGGCCTA ATCGACCAGC 
    CTTTGACTGT CTGCTTTCAA GATCTCATGT TACAAACCGT GATGGGAAGT 
    TTCGTCGACA CTACCAACTA AAATTTGGTT TAGAATGAAT TGATTTAATT 
    TGTGTCTAAA ATTAGAATCC GTGGGTTCCC TAGACATTAT CCCCATAGAG 
    TTTAGATTCT TTGCATCAAC ACTCTTTTAA GTAGATCTAT CGGATTTTAA 
    CGGAGGAGGT TGGTGGAGAA AATGTTGTAT GGGTTGTCAG AGGTGAAGGA 
    ACGATTTTGT TGGACCTGAA AATTATGATT TTGATAGAGT GTTGAGTCGG 
    TGGTAAGAAG CAGAAGATTG TTGGTCAGAA AAATCCGGAG CATGACAGAG 
    AGACAAGGGA ATTGAGGGCA ATATTATCAT TTCACAGATC AAAAAGTTCT 
    CAAACTTATA AATTCAAGTG AAATGTGTCT TTTTCTAATT TTTTTAGGCC 
    AAAATATGTC TATATCTATA AAAGCTCCCA AAAAATGACT AACTTCACAA 
    TACCCCACAC ATTATGGGGG GTTTTTTCAC AATTGGTCAT AAAATTCATA 
    TTTGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 11104860 [Map]; Strand: c
      • AT3G29130.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -954; Region: promoter
      • AT3G29140.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -945; Region: promoter
    Flanking Genome Sequence: 53-4049-1 - 3-prime edge 
    ATGGTAGTCA TTGAACAATA GCAATTACGA GTATTCTTCT GTATGGTTTG 
    TGTGTGTTTC GAACCTGGGT TTTGGATTCC ATATGGTTGT GTGGGTGAGA 
    GATAATCCAA CTAAAAAAAA TTAAGAAAGA GAGAAGAGAA AATTATTAGG 
    TTTGTCTGGG TGACGAAGGG TAAAATCGTC AATATCAAGA GATAGAAGTA 
    CTTAATTCTA TAAGCACATG CATTTTGTGC CTGTATCGAC AACGACATAA 
    AATTTTAAGT GCTTTATTCG TAATTGATCC CATTTTTTTG AGTGTTTATG 
    TAGATGAGTA TTTTTACTTT TGGTGATTTG CAAGAATAGC CATATTTAAT 
    AAATGAATTA AGAATATAGC AGCATAATTG TAACAATTAA TAAATAAGCA 
    TGAGAGACAA TGGAAAAGAC AATTTTAGTG TTTAGCTGTA TAAAAAATAT 
    AAATGGACTA TTATACATAA AAGTATATCA TATTATACAC TTTAATTGTT 
    CATAACAAAT TCATGAAGTA TTGTAAAAAA TAAATTGGAC AACAGAAAAT 
    ATAACCAAAA ACATACATTA TAGTATGTTT TGATTGAATT AAACTAGAGT 
    TTTGATGGAA GAAATCTAAA CCCTAAGAGA ATTTAGAAAA TCCAAAGAAA 
    CTAATTTTAG ACATGATCCA ATCAATTAAA CTCTAATTCT TTTATCCTCA 
    AACTACTAAT GATTTTGNGT

AT3G29130.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371); Has 135 Blast hits to 135 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G29130.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371).
Link
InterPro Scan - TAIR

AT3G29140.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR