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53-3989-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216902 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3989-1 - 5-prime edge 
    CTCAACATAA TCTTGAACAT CATTAATATC ATCATTATCA GCATCATCAA 
    GAGCTGTAAT ATCTTCACTA GATGTATCTT CCTCATTATA ATCTTGAACA 
    TCACTAATAT CATCATCATC AAGAACTATG AAATTTTCAC TAGATTTAAC 
    NTTCTTCCCC ATAATCTTGA TCATCATTAA AACCATCATC ATTGTCATCA 
    AGAACCGTGA TTTGCACTGA ACTTCTAAGC CTTTTACACG TTGCACGACC 
    ATAGATACAG AAATTGAAAC ACCAAGAGCC ATCAAACTCA AATTCTAAGA 
    ACTCTCCACC TTTCAAATCT TCGTCCTTGA CTATCGTCTT CCACCCATTA 
    ACCATAACAA ATCTCTCACT ATCACCACAA AACTTCCTAA ACGCCACTTT 
    CCAGATGTTT CCATAAATGC TTCTAACAAT TACATTTTTA GGCAACGACT 
    TTGGTAAAAA GCTGTTGAAA GAGATGGGTA ATTCCTGAAG AGGAAGGATC 
    TAAAAGTTTC AATAAACTAA AAATCTACAT ATAACCAAAA ACAGAGAGAG 
    AAGTGTATTT TTACCAAATC ATCTCCGGAA TCATCAGGGT AAGTACACTT 
    TGAAGAACTT TGGAAGACAA TCATCCACAG AAATTCCTGT TCCAAAGCAA 
    GAAAAAAATC AGAACATAGG ATAGGGTATG TGATTGGAGA ATCAAGAACA 
    ACAATN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216804 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3989-1 - 3-prime edge 
    ATGTTGAGGA AGATACATCT AGTGAAGATA TCATAGTTAT TGATGATGAT 
    GATGATGATG ATGATGATGA TGATGATGAT GATCAAGATT ATGGNGACGA 
    TGATCATGCT GATGTTGAGA AAGAAAGATG GAGAGGAGTC ANAACAGAGA 
    AAAAAAAGAN AGGTATAATA GAAACTTTTG TCTTGTGAAG TCAACTGANA 
    CTGACAGCAT CACTTGTCTT TTTATTTTCT TGCGTATAAA TTTTGATAGG 
    TTCTTCTGGA GAGCATGACN GACAATATCT GGATAATCAC ATGAACCCTT 
    TCTTTACAGT GAACCANCAT CGGCAAATAA AATATAATAT GGTAAGAAAT 
    GTGAAGAAAG TCTCATGTCT TTTTGCATTT TCATTAAAAT AATGNACCAC 
    TTCTGTTTTA TGATGTTATC TTTGTAATGC AGCTGCNCAT ACCAACTNAG 
    GTCATAACGA AGTATGGCTT ACACTTCCCT GAGTTCATCA ATTTGATTGA 
    TCCACTCGAG AAAAACTTTG GTAAATTGAA GAGGAAAGTT NAGGGTCAAA 
    CAATCNAGGG ATTCCGTANT ATAATCAGAA GGAATAATGT GAAGTTGAAT 
    GACNAGGTGA TTTGTGAGTT AAAAAAGGAG ATGGATGGTC TTGTTCNANA 
    AATCAAGGTC CATGTTATAA GANGATGATC TCTTGATGAG GCTTTATGCG 
    TNACCTCCAA GACATTATCT NTT

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR