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53-3738-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24301334 [Map]; Strand: w
      • AT5G60430.2 - [+] show detail - drug transmembrane transporters;antiporters
        Distance: -274; Region: promoter
      • AT5G60430.1 - [+] show detail - drug transmembrane transporters;antiporters
        Distance: -299; Region: promoter
    Flanking Genome Sequence: 53-3738-1 - 5-prime edge 
    CGGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TATGGACAAG TGTGCTCGTT GTATTCTGTT 
    TATGTGCAAA ATGATGTGGT TCGTGGTGTG TTAGACCAAG TCCAGCAATG 
    GTTTTTAGTG GGTTTTTATG TTAGATTTCT AAGTAAAATG GGCCCAACAG 
    AAAGAAAAAC AGANCNATCC ATTTANGATC GTTCCTAAAA NTGGGTTTTT 
    CGCGACCCAA TAGAAACCCA TACGNGGCNA NANTTTATTG GGTAAAAGTT 
    TTGACTCAAA AAAAACAAAA NNNNCCCNCG TTTAANATTT TNAAANNCTN 
    CGCTGNGNNN GCTTCNTGTT CNAANAAANA NNCNAATTGG AAGGGNNNAA 
    CAAACTCGGT TNTTNGGANA NNAAAAAAAN NCNGNTCCNA ATTNCTNNGN 
    NGATGNTNTT GGNGGAAAAC CCACNTCNNT CAGATTCCGG GGGGNAAAAA 
    AACTNANTCG AAGTNTNGTG GGGAAAGACN ANNNTTTTAA CTTNTACTCC 
    NNCNCNTTNT NAANNAANAA TNTTNNNCCA CAANCCCCNG GGGNTNGNGN 
    ANNNNNANAA NNTTTTTTAN TNTNACCACA NAANNGGGNG ACCTTTTNTN 
    CNNNNNGGGA ACNNATNNNT NNNNANGAAA AANAAAGGGN GNGGGGGNTT 
    TTNNGTTAAN NGGAAAAAAA GNAAAAAAAA NNNNGNNNNN TTTGGAAGTT 
    TTAAAACCAA AACAAAAAAC CNGAGNGGTA TTTGCTAAAA TCNTGG

AT5G60430.1

Model type
Protein coding
Short Description
drug transmembrane transporters;antiporters
Computational Description
drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60430.2

Model type
Protein coding
Short Description
drug transmembrane transporters;antiporters
Computational Description
drug transmembrane transporters;antiporters; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: proteinaceous RNase P 3 (TAIR:AT4G21900.1); Has 105 Blast hits to 104 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR