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53-3710-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7226953 [Map]; Strand: c
      • AT2G16670.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 53-3710-3 - 5-prime edge 
    TTAAAGATGG ANTCTTNNGN ANTGTTACAC NGNNNATTCT CAANTNGTAC 
    ATNATNNTAG TTATGAACAG GAAAANGNAA CNACACAAGG AGGTTNGAAG 
    CGACAAGNCC NACAGTANTG NGATCTCATA ACAAAAGGGN TNAAACGAAA 
    ANCNNACACN TGANNNNACC ANNNCNGGCC GTTGACCANA CGGGNGCCTA 
    NTTCATGAGC GATCTTGTGT GGCTACTCCA GAGCGAAATG GCAGAGTTGA 
    GAGAAAACAT AGACATTTAC TTAATGTTGC AAGGGCGTTG AGGTTTCAAG 
    CCAATCTACC AATTCAGTTT TGGGGAGAGT GTGTGTTGAC TGCAGCATAT 
    CTTATTAATC GTACTCCAAG CTCGGTGTTA AATAACAGCA CACCATATGA 
    ACGTTTGCAT AAGAAACAGC CTCGATTTGA TCATTTGCGT GTTTTTGGAA 
    GCTTTCATGG TGTANCCAAA GTCCGTATGA NTCTTTGGCT TTGTATGTTC 
    TAACAAGGAA ACACTACTTA GGCTTATAAG ATCGGGATGC GGTTTAAGTT 
    CTTATACTCA ATCATACACA TGACATCAAG TCATATTTGA CTCCAAAACA 
    CTAACCAACC TTCTTCTTGC TTCTCAAAGC T

AT2G16670.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.2e-190 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR