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53-3604-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16702072 [Map]; Strand: c
      • AT3G45530.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3604-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TATTTCTAAG AAGAAACGAC ATTTTCTGAG 
    CTCAGAACCT CTCATTCTTT GCTTCGAAAG CATTATCGAC GATGACTTTT 
    TATGCAGAGC TTGTTATCAA ATGTTTTGTG AAGGATTCTT CTACTCTTCT 
    AAAATTTGTG GTGTGAACTT TGACTTAATA TGCAGTTCGA TTACAATGCC 
    TTTTATCCAT GGAAGTCACG ATCATCACTT ACTCTACGTA AAACAAGAAG 
    AAGGTAACAA GAAAACTTGC CACAACTGCG ACAACGAACG TGCTAAAGTC 
    CTCCTAGGTT GTATCAAATG CAATTACTTT TTGGATTTCC GTTGTGCTAC 
    TATGCCATTA ACAATAATGC TTCCAAGGTA TGATGATCAT CCACTCACTC 
    TTTGCTATGG TGAAGAAAAG GCAAGCGGCA AATATTGGTG TGATATTTGC 
    GAAAGAGAAA CAAATCCAGA GACTTGGTTC TACACTTGTA ACGATTGCGG 
    TGTCACATTG CATACATTTT GTGTACTTGG AGATATCAGA AATGCCAAAG 
    CAGGAGGAAG TTTCAGACAC CATGGTGAAC TTGAATTGCT ACCTAACAAT 
    AGATCTACAC GACCACTTTG CAACAATTGT CATAGTCGTT GCCCAGGTTC 
    ATTCATTATG AAGAGTTATG ACGGCGGGGG AAGTTTATTG GTCTTGGTAT 
    TGGGTCTCAT CTCAGCTANG GTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16702120 [Map]; Strand: c
      • AT3G45530.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3604-1 - 3-prime edge 
    GAAATATTAG CACACTTTTC ATGGAGAATG AAGCTGCAAT TTGATTTTGA 
    ACACTTGTAG AATGTGTAAG AACCAATGGG AAGAACACAT GCTCCACACA 
    AGCTACTTTC TTCTCCGTCT TTGCTGAGGC TCATGAGGTT ATGCTCATGA 
    GCGAAATGAG TGATTGTGTT GTCATCATTC CTCTTGAATG GCTCGATATC 
    TTCAACTTCT TCAGGTACTC CATCGAGCTC TTTCCCATTC CATACGTCTT 
    TCCTTGTTGC ACATAGTGAA TGAATAGCAT ATTGAGGACA AAGAGAACAA 
    GAATAAGCAC CACATGACCA ATCAATCTCT TCAAAACAAA CTCCACATCG 
    CCATTCTCCA AGACCAAGAG GATACTTGAA CGAAACGCGG TGGTCATGGT 
    GATTGACGTT AATAACACGT GGTAAATGAG CACACTTTTT GTGAACCATG 
    AAATCACATT GATGACACAC ATAAGGAGCC CGATCACCTT TTGTCCCACA 
    AGCATCACAA ACGAAGGAGA TCAATCTTGG CATAAGATTG AGTGTATGCT 
    CATGTACCTT GAGATTTGAA AGAGCAACTG GTGGGGTTTT TGTTTTTGCG 
    CATACCAAAT CCAAATTGAA CTTACAGATA TCACAATGAT AGATGAATTT 
    TCCAGTGTCT TCTCCGCATA GATGACATTT TGGATCAGTG TAAGTGGGTG 
    CTCCTTCGGT GAGAAGCTN

AT3G45530.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G27473.1); Has 1872 Blast hits to 663 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 1850; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR