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Mutant Lines
53-3558-1

53-3558-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25586816 [Map]; Strand: w
  - AT5G63930.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
    Distance: 317; Region: intergenic
  - AT5G63940.1 - [+] show detail - Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
    Distance: -1259; Region: intergenic
Flanking Genome Sequence: 53-3558-1 - 5-prime edge
```
TATAAATTAT TGTTAATTTA ATGAAGACAC CAATAATAAT ACGGTCACTT 
TTGCTCTGGA AATCATAATT AGCGTAGATC ACGGTTAGCT GGATTTGTTA 
TAAATATAAT ATTTCACGTG CTATTCTGAA TCGTGCCCAC CAGATTATAT 
ATCTAATCTC TTCTAGTTTT TAATTTTAGC ATTGTGGTAG TGAGTTAATG 
TGGATCTGTT TTTCTCAATA TTAATTTTGT TAAATAATTA GTCCTCTTAG 
CCTTCATCTC ACCTCGA
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 25586700 [Map]; Strand: w
- AT5G63930.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: 201; Region: intergenic
- AT5G63940.1 - [+] show detail - Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
  Distance: -1375; Region: intergenic

AATTTATAGA CCTAATCACT ATGAAAAATC AAGTTGATTA TAACATGGAT 
ACTTCCATAG TATTAAATTA TGATCTATTA AATGATCCAA TGACCAAAAA 
CAATATCCAA TGTTAGAGAG TACTACTATT TACCTTGTTC ATACTAAAAA 
GACAACNGGT AATTACCGTT TGGGTCCCAT GGATAATGAT TGGATTAACA 
CTAATTAATT AAACCTAACG GTAACTTGTA GATATAGATA CTTGCTTATA 
TCTTTTGATA TAGCTGCGTG CGTATAGACT TTACAATAAT TATTCGCCAT 
GGTTACATAG AAGAATAATC TCGTGTGAAA AAAGAAGAAG ATACAACAAG 
AATGTGTATT GTGTCATGGG GTAGTTGTTT GTGTCAATTC TTCTGTATCC 
AAATGTTC

AT5G63930.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT2G33170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63940.1

Model type: Protein coding
Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Computational Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G21590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR