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53-3529-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23260465 [Map]; Strand: c
      • AT5G57391.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 3281; Region: intergenic
      • AT5G57400.1 - [+] show detail - unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bac...
        Distance: 1520; Region: intergenic
    Flanking Genome Sequence: 53-3529-1 - 5-prime edge 
    GGGAATGATT TGATGTAGCT TTTCAAAATC CGACCCATTT ATTCGTTTTC 
    TTATTTCGTT TTGTTTTGTT TATATCTGTA GTCGTATTTT TTCACACTAT 
    TCAGTTAGTG TTTTTAGACG ACCTTTTTAA ATTGTATGAT ACGATTATAC 
    GAAGACCCGC ATTTGAATCT GGACCGGTTG GCACAATGTT TCCATCGCTC 
    GGTTAAATTA AATCAGTTAC CTTCGTGTGT CATATATTAA CAAAAATGCA 
    AGTGTACTTT CATGAATTAT TATTGAAATC TAAAACATGC ATGGTAGTCA 
    AATAAATAAA ATATATTTCG GCGCCGAACT CTTTGTAATT TCTACTCTTC 
    TTTTCTTTTT ATCTTTTTAG TACTCTTTCG GCTTTTGTTA CTTGTTTTAT 
    TACTCCTCGT TTCTTTTTAA AACATATCTT TCATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23125988 [Map]; Strand: w
      • AT5G57120.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -1475; Region: intergenic
      • AT5G57123.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 934; Region: intergenic
    Flanking Genome Sequence: 53-3529-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTAAATATAT 
    AATATATCAT TCTACTGTTC TAGTTATATT TTTGATATGA ATCTTGTTAA 
    TAGTTTCAGT AAGCTGTTAT TCTATTACCA CTGTTACGTT TTTTGGACTG 
    AAACATGTGA AAATCTGAAA ACAGAAGCCT CACCTGCCAC AGCCGTATTT 
    GTGAACNGGT TTGCTCTTTG TAGCAACATA GTTTCATGAT TCCCTCGTAT 
    AGGCTGGTTT AAGGTTTTAA TTGTTTTAAT GATCTATATG TTATTCCTTA 
    TTAGTATATC TAATGTTATA GTACGTTGAT GAAGATATTA TTCTTATGAT 
    AAATGTGCTG AACGACTTAC ATTTTTCTTA AAAGTAAAGC GTATTGATAA 
    AATTAGGTAG AAGAAGTTAT ATACATACGT GAGGGTGGGC CAAAGTCGTA 
    TTTATTTCGG AAGCGTGTAC TATAACATTA GATAACTCGT AGCTGCAACA 
    AGAAAGTTCA ATGTACGTAC TTTCGAAAAT CAAGTGGCAA TTGGAGAGAA 
    ACACAAAATT TGTTTCAACA AGGAATGAAC TAGGGTTTGT CATCACCCGT 
    ATCACATTAT TGTAAGTTTG TAACACCGTA ACGTCGCGAA TACCGTGTGG 
    CAGGCTAAGA ACATCAACAG GAGCACCAAC TCTCAGTAAT AGACATTTCA 
    TATGTAACAT CAAAAGTGTT TAATGTANAG TTTTCACTAA TGCAGTAATA 
    AAATTACCAT CTATCAGTCG TTAAC

AT5G57120.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 101969 Blast hits to 55488 proteins in 2506 species: Archae - 424; Bacteria - 13843; Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses - 569; Other Eukaryotes - 34792 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57123.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57391.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57400.1

Model type
Protein coding
Computational Description
unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR