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Mutant Lines
53-3346-1

53-3346-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 4487139 [Map]; Strand: w
- AT5G13920.1 - [+] show detail - GRF zinc finger / Zinc knuckle protein
  Distance: 0; Region: exon2 (CDS)

ATGGTGAAGG CAGGACGGAA TTTGATATCT TCGTCGGTTA CTTTGTCACA 
CCATTTGAAG AAACAGCAAT TCTGAGCCTG CGAATTTCAA ATGTCGTCAG 
TAACAAATTC AAATTTCCTC GCGAATTTTG CAGGAGATGA AGAATCAGTA 
AAGAAAGCGA GTACGAACCG TTGGACACTT GTAGAACTTC CTTCCGGGAT 
TTTCTCGAGT ATTCGCGACC TTGATTTCAC AGAAACCTCC GCCGCATGGG 
CATTGGATCG CCGGTGGAGG ATCATCGGTG TAGGATTTGA GAGGACAATC 
GTTGATCCAG TGGCCAGCCT GACGGCATCG GAAGCAATTT CCGGTCTGCA 
TTGTGCCGTT AAGCATTCGT CGAACATTCT TCTTC

3 prime edge [+] show sequence

Chromosome: 5; Position: 4487023 [Map]; Strand: w
- AT5G13920.1 - [+] show detail - GRF zinc finger / Zinc knuckle protein
  Distance: 0; Region: exon2 (CDS)

TTCACCATCC CGATTTGTTC CTGCGGTGCT GGACCTTGCC GGAGAGTTAA 
AGACGTTTCC GGTAGAGCTT ACCTGATATG CTGCATCAAA AAGGTTTTGA 
CTCGTTCGCA AGTTTAAAGC TCATAGTTGA TAATTCTGGT TAACATTGTT 
TTAAGAAATT GTGTTAGGGA TTTGGAGCTT GTGGATTCTT CAAGTGGGAA 
GATGTTGAGA TGATTCCTAG TTGTGATGTT ATGGATGA

AT5G13920.1

Model type: Protein coding
Short Description: GRF zinc finger / Zinc knuckle protein
Computational Description: GRF zinc finger / Zinc knuckle protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: GRF zinc finger / Zinc knuckle protein (TAIR:AT1G54930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR