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53-3226-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15061169 [Map]; Strand: w
      • AT5G37830.1 - [+] show detail - oxoprolinase 1
        Distance: -392; Region: promoter
    Flanking Genome Sequence: 53-3226-1 - 5-prime edge 
    TATCCATATT ACGAAACTTT ACATACATAC TAATATGCAC ATAAGAAAAA 
    TCGTTTTTTT TTGTTACATG TNGGGAAAAT ATAAAATNGT AAAATACACT 
    AATTATAATG ATTTTCTAGT ATTTTAAATC ATATTTTGTT AAAACCAAAA 
    AATTGAGNGT TAAGTAAAAA AATTACAAAA AAACATATAT CTTTTTCACT 
    CTTCTTCTTC TTTAAAGAAC GAAAAANGAC TAATTAAAGC TTTAATTTCA 
    ATTTTCCTTC TTTTATAGGC NCATTCTAGG TTNGGGATAT ATGTTTAAAC 
    TAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15284888 [Map]; Strand: c
      • AT5G38260.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3226-1 - 3-prime edge 
    GACAAGACCT TCATAAGTTT ATGCTGTTAA TAATTAGGTC TGTTCCACAA 
    AGATTATTTT CATTGAATCT TGGAAGGAAA AGGATTAAAC ATATACCTAT 
    TTTTGCTTTT TTGGAGACCC CTGCATGAAT AAATACCATG AGAAACATTT 
    CNGTTCAAAC GCAAGACAGA ACTTAGAAGC GTACTTAAAA AAAACANTTG 
    AAACTCACAA ACCTATACCC ATCTTTCCAC ATGTATGCTC GTGAGGCTCA 
    TCTTTACAAT AACAGACGAA TGCTTTTGAG CTCTGATTAA AGCCACAAGC 
    ACCTTTTGAT GCTACGCATA GGGAACAATC ACTGTTAAAG CCAAGTTCGA 
    AACCCACATC AAGAACCTTC TTTATAGCCT CGAGACTCTG ATTTGTCGCT 
    GTTGTCTCCA TGGCAGATCG AGAAACAGGG ATATCGACGT TTCTTTCACA 
    CGATGCACTT AACCCATCTA AGATAGCTCT ATCCCCAGGA TGTGAAGGGG 
    ACGAGACAAA GTA

AT5G37830.1

Model type
Protein coding
Short Description
oxoprolinase 1
Curator Summary
Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.
Computational Description
oxoprolinase 1 (OXP1); CONTAINS InterPro DOMAIN/s: Hydantoinase B/oxoprolinase (InterPro:IPR003692), Hydantoinase/oxoprolinase (InterPro:IPR002821), Hydantoinaseoxoprolinase, N-terminal (InterPro:IPR008040); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G38260.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR