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Mutant Lines
53-3081-1

53-3081-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 4023875 [Map]; Strand: c
- AT5G12410.1 - [+] show detail - THUMP domain-containing protein
  Distance: 0; Region: intron1 (CDS)

CTTCCGGTGA CCAGAGCAAG AAGAGAAAAC AGCATTATCG CCCTCAAAAC 
GTAATCTTTC ACACACTAAG TCTATCTGTG GATTAGCTGC TAACTATTCT 
CATGTGTTTA ATTTTCTTCG TCTAATTTGT TGTTAGCAGA GACCAGTGAA 
GAAGAAGGGA TCTTACCCTT TGAAGCCAGG TGTTCAAGGT TTTTTCATC

3 prime edge [+] show sequence

Chromosome: 5; Position: 4023991 [Map]; Strand: c
- AT5G12410.1 - [+] show detail - THUMP domain-containing protein
  Distance: -3; Region: promoter

ACCGGAAGCC ATCGTCGGAG AGAGAGAGAA AGAGAGGTTT TTGCGGAGTT 
GAGCTAAACA CAGTGACGAG GAGAATTAGT TAGGTCATGC CTGAATGGGC 
CTATTGGGCT TGGTCTTGAC CCATTAGCTA AAACCCCTCG TTACCTTTGT 
GATAAGCCTG ATACTATATC TTTCACATTT TTGTTAATTC TTAATTGCAT 
GTTGATCGAA ACCTGAGAGA AGTGTTGGTT ATATTTGTAT CGTTGGAAAA 
TTGGTTGGGC GATATCGGTG GTTATATATG CACCTTTACT TTAGTGATCA 
CCTAAGAATT TTCAATTTTT CATTGTAAAT TTAAGTTATA ACAGGTGGGG 
TTGCTGATCA AAGAAACAAA ATTCACAAGT CACATCATTG AATGACGCTT 
TCTTATTAAT TAGGACTAC

AT5G12410.1

Model type: Protein coding
Short Description: THUMP domain-containing protein
Computational Description: THUMP domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: THUMP (InterPro:IPR004114); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR