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53-3053-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 78663 [Map]; Strand: w
      • AT2G01080.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3053-1 - 3-prime edge 
    TTCACACTGC GCTGGTTAGG CCAGATCGCT GAGCGAGCAA AATGCGGGGA 
    GAAAAGAAGG GAGAAGAACC TGAACACCCG GTGAATCGAA ATTCATGACT 
    CGGATCTTAG CCCCCACGTC TCCGCGGACT GTGAGCTCCA CTCGGTCGTT 
    TAAGGAAGCA TCTCTGACGA GATCGGCGGC GTGGGCTTGC ATAAGATTGA 
    CTCTGTCGAC GGAGATGGTG GCCTCAACGT TCTTCGTACT GTGCGCATCC 
    TGGTAGAATC CAGGCACCGT CGCCCTCCCC AGTGGCATGC CTTTGTACAT 
    GACCGTGAAG CTGGACTCAC CGTACCTGAT TCCGACCTTG TTTGGGTTGA 
    CGGCGGTGAA GAGCATCCGG ATGGTGAGGG AGAGGGAGGC GGC

AT2G01080.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G27080.2); Has 675 Blast hits to 674 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 673; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR