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53-2962-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16740660 [Map]; Strand: w
      • AT5G41820.1 - [+] show detail - RAB geranylgeranyl transferase alpha subunit 2
        Distance: -144; Region: promoter
    Flanking Genome Sequence: 53-2962-1 - 5-prime edge 
    ATGGGACGTA GTCGGAGACA TCGATTTCAC AACAATGTGT TTACCAAAAA 
    ACAAGAAAGC ATGTTCGTAA TTTTCAATTG AACCGGTATC AGTAATTTTT 
    GATTAAACTC GGTTTACTCG TACCGGTTCC TTTATCTATT TATTGTTGTT 
    TTTAGGTTTC CGGTGGGAAC CCTAAACAAG AAAACGTCAT TGTGAAGCAA 
    TTCCCTAAAT CTCAATGCAC GGTCGTAAGA GAGAGGAGGC TCCGAATCCA 
    GAGGAGACCG CAGCTAAAGC CCTGGAGATC CGGTCCCTCC AGTCCCAGTT 
    CATGTCACTC GA

AT5G41820.1

Model type
Protein coding
Short Description
RAB geranylgeranyl transferase alpha subunit 2
Computational Description
RAB geranylgeranyl transferase alpha subunit 2 (RGTA2); FUNCTIONS IN: protein prenyltransferase activity; INVOLVED IN: protein amino acid prenylation; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611), Protein prenyltransferase (InterPro:IPR008940), Protein prenyltransferase, alpha subunit (InterPro:IPR002088); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase alpha subunit 1 (TAIR:AT4G24490.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR