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Mutant Lines
53-2889-1

53-2889-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 21936667 [Map]; Strand: c
  - AT1G59690.1 - [+] show detail - F-box associated ubiquitination effector family protein
    Distance: -847; Region: promoter
  - AT1G59700.1 - [+] show detail - glutathione S-transferase TAU 16
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-2889-1 - 5-prime edge
```
GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
CATCCTACTT TCATCCCCGG AGACTCGACA ATCGGTTTGT TGTTGTGGAG 
GAGAACAGGG ACTTTCTTGT GAACCGGGTT TGATTTGAGA AGAAGCTCAC 
TCTTGGATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 21936523 [Map]; Strand: c
- AT1G59690.1 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: -703; Region: promoter
- AT1G59700.1 - [+] show detail - glutathione S-transferase TAU 16
  Distance: 0; Region: exon1 (CDS)

CAGAGCTACT CGGTTGGCTA CGGCACCCGG TGCATTTCCC CAAGGGTGGC 
CTAAAGTTCC TCCACCGAAT TGTAGTACAG AATCATCTCC AAAGATCTCG 
GTCAAAGCAG GCATATGCCA AACGTGAATA CCCCCTGAAG CCACAGGCAG 
AACACCAGGT AGTGAGACCC AATCTTGAGT GAAAAAGACT CGGAGTCTCT 
CAACATCGTT GAATACATTG ATGAGACGTG GAACTCATCT GCACCGTCCA 
TTCTTCCTTC ACATCCTTAT GATCGTGCTC TTGCTCGCTT TTGGTCTGAC 
TTCGTTGATA ACAAGGTTTG GTTTCTTTCT TTTCCTTTAT CCAACAATTT 
CAATTTCTTA TTATTTCTTT CAGTTTTCTT TTGATGGAAT TTTTTTGAAC 
TTTTTTATTA TTATTGTTAC ATTCCAATGA ATTTATCTTT CGTGCATGGA 
TTATCTTGGG GATATATACT TAGATCGTCC TATTTGAGTG ATTTATATAT 
GACAAAAATA AAAGAGTAAT GTTGTATTAC ATAATACGTG GATATAAACT 
CGGATGAAGA CACATTACCA ATACT

AT1G59690.1

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G13060.1); Has 186 Blast hits to 184 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G59700.1

Model type: Protein coding
Short Description: glutathione S-transferase TAU 16
Curator Summary: Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description: glutathione S-transferase TAU 16 (GSTU16); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 15 (TAIR:AT1G59670.1); Has 5165 Blast hits to 5149 proteins in 1027 species: Archae - 0; Bacteria - 2130; Metazoa - 418; Fungi - 155; Plants - 1971; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink).
Link: InterPro Scan - TAIR