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53-2831-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21783779 [Map]; Strand: c
      • AT3G58940.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: -116; Region: promoter
    Flanking Genome Sequence: 53-2831-1 - 5-prime edge 
    GCCACAGGCC AGGTTTTACC AGTTTGCTAC TGGGCTTTTA CTTGGGCTTG 
    ACTTGTTCCA CCATACTTTC GCCGTTTCGT AGCCCAAATT CAAACTGCCC 
    CGGTTTGTTT ACCCGTTTAC CCAATAAACC GAAACCGGAG CCTAAACTCG 
    ACTGGGTCAC CTCACTGGTG TAATGTAGTG GACTAGTGGT GTCCGCTTTC 
    AATGCAAAAT CCTCAATTTG GTTTCGGCTT CTCCGATGCA TTAGCATGTC 
    TTGTCGAACT GAAAGTCTGG GACTTTCCCC TCTACCTTCC GCTAAATATT 
    TGCGTTGACT TCATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21783895 [Map]; Strand: c
      • AT3G58940.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: -232; Region: promoter
    Flanking Genome Sequence: 53-2831-1 - 3-prime edge 
    CCTGCGGCTG GNTGNNGCAA GTGGNGGTAT TTAAAACANA GTCTCCTTCC 
    TCTTCTTCTT AAACGTTGGG TNTAAAATTG CAGAGAAGTC TATCTATATA 
    AAGAGCCATA NAGGGAGAAG AAAGCAAACT TGTCGAAAGA AAAGCANAAG 
    ATGTCCCAGA TATATATCAA ATATCTGAAT GAAATGGTGT CGTTTTAATT 
    TAGCTTCTAA CAAGAATCAA AAAGAGCCTT TGACATCAAA CTATGAGCTA 
    AGTTTTTCCC AAGAAGACTT CAATCACTGT GCAGTCCACT TCTTA

AT3G58940.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G58930.1); Has 1892 Blast hits to 1858 proteins in 32 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1882; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR