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53-2333-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17543902 [Map]; Strand: w
      • AT2G42040.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 2...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2333-1 - 5-prime edge 
    GATGTAGACG TCAAGAGTCG TACTGATGCA TCGGGCAGGT ATGTGAGAAT 
    TCGATAAAGA TTTCTTCTTA CATCAAAATT CCTTCTCTTG TCTCTGGACT 
    CTCATATAAC TTTGCGTGGT GTAATTACCT TATTGGAAAA AATATACCAA 
    ATTTTCTTTT CTTATTAGAT CCAAGCTTCG AAAACCCCAA CACTGACTGC 
    AACTAGATCA AGATCAAAAC TTTCATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17543786 [Map]; Strand: w
      • AT2G42040.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 2...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2333-1 - 3-prime edge 
    TCTACATCAC CATTATCATC ATCCTTTTAG CAAAAACAAA ACAGAAGAGA 
    AGTAAGATAA ACAATTGAAC ATTCCATTGT AATAAGATCT GCAAATGACA 
    AGAGTTATTC TCAGTGGTGT AAAATTGAAC CAAATATTCC CACCCAACCA 
    AAAAAGTAGT TTTAAAAATA AAGAAAAAAG AGAGTCAAGT ACGGTCTTCT 
    GTCTTCATAC ACGACACAAC AAAAACTTGC ACCCAAAAAT CCAATTTGTT 
    ATAATCCATC GATAAAAACG AATTGGATGT TTTAAATTGG TGTCTCTATA 
    CGTATACTAA GAAGCT

AT2G42040.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR