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Mutant Lines
53-2256-1

53-2256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 385064 [Map]; Strand: c
  - AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-2256-1 - 5-prime edge
```
GATCTGTTCA GATAAAACCG GGACTTTAAC AACAAACCAG ATGTCTGCAA 
CCGAATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 385136 [Map]; Strand: c
- AT4G00900.1 - [+] show detail - ER-type Ca2+-ATPase 2
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTTACAGA 
TCACAGTTGT GCAACCGAGT GTCTCTACAC TCGGGAGCTT CCTCACTATC 
GCGTTCTTCT GCGCCATTTT CCTCGTCCCT AAAGCTAAAC ATGTCGTGAT 
CACAGCGGGT AAACCCTCGG GTATCGCTGC CACTGCGAGA GCAACAGCGA 
TTTTGAAGTA GTAAGTACAT TTCTCGAATG AAAACTTGAT ATTCACAGGT 
TTATAGCCAT CCACAACATC CCAAGAAACA AAGTTCTTGT AGTTTATCAT 
CCACACAAGA ACACAGACAA TGCAAATAGC TGTAGTCAAT CTACTCCCAA 
ACTCGTCTAG CTTCTTCTTT AACGGAGTCT CGCTCTCTTC AAGCGACGCC 
TCGTGAATCT GTCTCTGGAT TTTCCCGATC TCCGTATCCA TACCGATACT 
CGTCACAATG CAAACGCAGC TTCCGTTAAC AACCGTTGTT CCCGCGAAAA 
CCATATTTTC TTTCCCTTGC AGTTCACAAT CATCCAGAAC TACAAGATTC 
GCTCCTTTCA AAACCGGCAT TGCTTCACCG GTTAACGAGC TTTGCTCGAC 
TCTTAAAGTG GATGTTTTCA AACCGGAAAC TCTCATATCA GCAGGGACTT 
TATCTCCTAC ATTTAACTCC ACTATATCCC CTGGAACAAG CTCTCTAGCA 
GGCAAATTAG GCAACACATT CCCATCTCTC AAAACCTTTG CAGATTCACA 
TTGCATCTCT TTAAGAGCCT CAAGTGCTTT CTCAG

AT4G00900.1

Model type: Protein coding
Short Description: ER-type Ca2+-ATPase 2
Curator Summary: Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.
Computational Description: ER-type Ca2+-ATPase 2 (ECA2); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: calcium ion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR