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Mutant Lines
53-2206-1

53-2206-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 21783721 [Map]; Strand: w
- AT3G58940.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: -58; Region: promoter

TCAAAGCGGA CACCACTAGT CCACTACATT ACACCAGTGA GGTGACCCAN 
TCGAGTTTAG GCTCCGGTTT CGGTTTATTG GGTAAACGGG TAAACAAACC 
GGGGCAGTTT GAATTTGGGC TACGAAACGG CGAAAGTATG GTGGAACAAG 
TCAAGCCCAA GTAAAAGCCC AGTAGCAAAC TGGTAAAACC TGGCCTGTGG 
CTGGTTGTTG CAAGTGGTGG TATTTAAAAC AAAGTCTCCT TCCTCTTCTT 
CTTAAACGTT GGGTTTAAAA TTGCAGAGAA GTCTATCTAT ATAAAG

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 21783598 [Map]; Strand: w
  - AT3G58940.1 - [+] show detail - F-box/RNI-like superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 53-2206-1 - 3-prime edge
```
AATGCNAAAT CCTCAATTTG GTTTCGGCTT CTCCGATGCA TTAGCATGTC 
TTGTCNAACT GAAAGTCTGG GACTTTCCCC TCTACCTTCC GCTAAATATT 
TGCGTTGACT TCATCTCACT CGACGA
```

AT3G58940.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G58930.1); Has 1892 Blast hits to 1858 proteins in 32 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1882; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR