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53-2194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17605311 [Map]; Strand: c
      • AT4G37445.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family pr...
        Distance: -378; Region: promoter
    Flanking Genome Sequence: 53-2194-1 - 5-prime edge 
    TTGCTATAAA TGAATTGTCT AAAATTTATT ACTAAACATG TATAGATCCA 
    ACCAATCATA CAATACAATG TTTTTTATTG TACTTTTCAA ATAGCTAGAT 
    TCATATTTTT GTCTTGTTCC TTAGAGAACT AGATTTGAAA AAGAAATAAG 
    TTAATGGATA TCTAATATGG TAGGCAAAAA GAAAGTGGGA ATAGAGGACA 
    AGTCATATTC CCCATGCTTT TATTAAAAGT ACATTACTCA ACTGTGAAGA 
    AATGGCTAAG ATTTTGTAAG TAAATCACAA GTTATACGAC GAAAAAAGAA 
    GAAGCACAAG TTATACTTGA ACCAAGGTCT TGTGTAGAGA TTCAAGATTC 
    TTGGCTTTGC AAAGACACAA ACCCACCAAG CCAAGTCTCT GATTCCACAC 
    ACCAATACAA ATTTGTATAT AACCATAACA TTTTCTTCTT TCTAAAGACT 
    AACTTCTAGA CAATATGGGT AGTTCAATGG GCTTTCTCGG AAAAGGTTTT 
    GCAATTCTTT AACCTAACAA TTATCGACTT AAATCGTTAT ATAACCGNNT 
    TGACAAATNN TCGNCCTATA TATGTTTCTA AATAGATTTC NATATTTGGC 
    CTANGGGTAC CACCNCNCNN ATNATGANTN TGGGNNTGGG NTCACTCTAC 
    AAACANTTTN CCCNNNNGCT ATNAACAACT NNNACNATTN CNCNNNGNTG 
    NTTNGACNTN TTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17605397 [Map]; Strand: c
      • AT4G37445.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family pr...
        Distance: -464; Region: promoter
    Flanking Genome Sequence: 53-2194-1 - 3-prime edge 
    CNNAGCGGCN GCNGGCGTTA NAGGTGGGTN TCATATANNA ANACTACAAT 
    TNTTGTNNAA NTNCNNATCC GTCTAGACNA TNATGAAACA AATTNNNTGA 
    NCNGTGTNTA CNCNNTTNGT CNTTCTCGGT TAGNATCTNC ANGTTNNTAN 
    ATANNCCCNT TNGGNGTANC AAACATAGCC CANNNNAATT CGACTTACCN 
    ACACTTTCAN NATCNTTTAG ANGTTCACCT CACTCTCGGA GCTTTGCTTA 
    TTGTTACATA NACGTTACTT ACACAAACAT TTTATTTTAG AGTAAATGTC 
    CATAATTCTG CATTAAAATT GAATGTGTCA TTTTCA

AT4G37445.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR