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53-2089-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17530177 [Map]; Strand: c
      • AT3G47570.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2089-1 - 5-prime edge 
    GGCTGAGTCC TATGCGTTNA GCTAATGATC CNTCTTNTNN GTTCATGACA 
    CTACAANNTA NACCAAAGTC ACTAACATGG GCGGTTAGAT CATCGTCTAA 
    AAGGACGTTG CTTGGCTTAA GATCGCAATG AGCTATAGGT TCATGACAAT 
    GANCNTGGAG ATAATCCAAA ACAGAAGCCA CGTCTATGGC AATGTTAAGC 
    CTTTCAAGAA GGGTCAAAGT TCTTGAGGGC CTATGAATCT CTTCCACTTC 
    CTCTGGGTGC AGCCACATAT CTAAACTTCC ATTAGGCATG AACTCATAGA 
    TGAGAGCTCT AAATTCATTT CCTTGAAAAT CAATACTCGA ACAAGCTGTC 
    AATAGTTTCA CAAGATTACG ATGTCTTATG TCCTTCAAGG ATTCACATTC 
    TGCCATAAAG CTCTTCATCT CTCTCNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17530292 [Map]; Strand: c
      • AT3G47570.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2089-1 - 3-prime edge 
    GCTCAGCCGG TGTTAGAGGA ACCATCGGCT ATGCCGCACC AGGTATACTA 
    TCACACATCT GTAGCATTAT ATGAAGAAAA TTAGTATCTA TCCTTTCTTT 
    TTATCATTAC AGTCTTCTTA ACATTGTTTC TATGAAATAT GGTGCAGAGT 
    ATGGAGTGGG AGGACAGCCA TCTATAAATG GTGATGTATA TAGTTTTGGG 
    ATTCTCCTTT TAGAAATGTT CACTGGAAAA AGACCAACCA ATGAGCTATT 
    TGGAGGAAAC TTTACCCTGA ACAGCTACAC TAAGTCGGCA TTGCCGGAAA 
    GAATATTGGA CATTGTAGAC GAATCAATTC TTCACATTGG TCTCAGAGTC 
    GGTTTCCCTG TTGTTGAGTG CTTGACAATG GTTTTTGAGG TGGGCCTTAG 
    GTGTTGTGAA GAATCTCCGA TGAACCGGTT GGCAACGAGT ATAGTCGTCA 
    AGGAGTTGAT CTCAATCAGA GAGAGGTTCT TTAAAGCCAG TAGAACGACT 
    TGGCGTTGAA GTGTTTGGTT TTGTCTACAA ACTTTGCAAC CCAATAAAAA 
    GGCTTATAAT ATCTTATTTC ATAAATTGGG GTTTTGTCTA AGAATGCTTG 
    TAGAATATTG CTAATGAAAT GCTTGTGTTA ATTAATAAAA ATGTATGAAT 
    GTTGTGGTAC CAATTTTATA TGGAGACAAC GTAGCTTTAT AGTTGCAAAT 
    CCACATTGTT CCCAATTTA

AT3G47570.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink).
Link
InterPro Scan - TAIR