Home
Mutant Lines
52-1285-1

52-1285-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 493578 [Map]; Strand: c
- AT2G02050.1 - [+] show detail - NADH-ubiquinone oxidoreductase B18 subunit, putative
  Distance: 1583; Region: intergenic
- AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: -1992; Region: intergenic

TATATTACCT ATATATTGAC TAGAAGAATA ATACAAAAAG CTACCTAGGT 
TATGATCATT GATCAAAATA ATCAAGTAAA CACATTCCAA AAGGTTTTAT 
CAGTGAAACA ATTTTACTAT ATTCACTAAT AAAACCTTTT ATTATCCTAC 
TGATGATCAT TGATCGATAA ACACAATTGC ATGGATGGAT AAAATGTCTA 
ACCGAGAGTT CAAGTCTCAA AAATCAAAAT GGTTAGTACT AATACATGTA 
TGAGAGAAAG TGGAAGCAAA TGAAAATAAT ACATTAAATG AGTCTGGCAG 
AGACAAATAG CTCCAAGAGA AATTGAATGA GTAATTGACT GTGGAGGTCC 
ATGATTCATG GCTTTTACCA CAATCAAAAC ATTCAATAAT TCTCTTTGCT 
TGTTTTTTTA TTAATATTAT AAAACTTTGT ACATACATGT AAGATAATGT 
AACCCAACTG GATTTTGGAC TATAAAAAAC ATAACATTCT TTTTTGTGTG 
TGGAAAATTT GGATGTGCAA ATCTCACCGA ACCATTCGAC GATTATCAAT 
GTTAATTTAT TATTCTATTG GGTCAATTTT CTCATCACCC ATTGATTGAA 
TT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 493689 [Map]; Strand: c
  - AT2G02050.1 - [+] show detail - NADH-ubiquinone oxidoreductase B18 subunit, putative
    Distance: 1694; Region: intergenic
  - AT2G02060.1 - [+] show detail - Homeodomain-like superfamily protein
    Distance: -1881; Region: intergenic
Flanking Genome Sequence: 52-1285-1 - 3-prime edge
```
GTTACTAATA TACAGCAACT CGTGTGTCTT TGACAAGCTG GTGACTGAAT 
ATTATATTTT AATTACCGTC TAATCAAACA CTAAACCATT TTTAAAATCG 
TTAAAGCAGA ATTTTGGCAT ATATGCAGAG AATT
```

AT2G02050.1

Model type: Protein coding
Short Description: NADH-ubiquinone oxidoreductase B18 subunit, putative
Computational Description: NADH-ubiquinone oxidoreductase B18 subunit, putative; FUNCTIONS IN: NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone, photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, B18 subunit (InterPro:IPR008698); Has 270 Blast hits to 270 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 75; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G02060.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G14600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR