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Mutant Lines
52-1134-1

52-1134-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 3535545 [Map]; Strand: c
- AT3G11280.1 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: -698; Region: promoter
- AT3G11280.2 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: -739; Region: promoter

GNGATAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCT ACTCTATGAC TCTATGTAGC CTTCTCTTCT 
TCAAAATTAA CTTAAGTTAA AAAACCTTGT ACAGTTTGAT TAGTTGATAC 
AACCGATATA CTTTTATTTG ATTTTCTCTG TTTGCAGAAA GTAATTTAAA 
ACTTATGTGA GCATCACAAG TAAAATGGAG AGATAGTGGG ATTTAATGAG 
CTTTAGCTAT TGAATCTGTC ACACTTTCTA AAAATATTTT CCACCGACGC 
ATAGATACTA AAACCAATCA TCACTTAATT CCAGGTAAGA ACTTAATCCT 
AAACAACCTC CTTAAGGAGA CAAAATTAAG AGATAAAAAG AGATAAATCG 
CGCCAGGTAG GGGTCGAACC TACGACCTTC TGCTTAGGAA ACAGACGCTC 
TATCCACTGA GCTACAGGCG CTTTTGATTG TAATTATCAA AACATTATAT 
TTATAACAAA ACCATACAGT ATGTCTCCGT GTGGACCAGA AAAAAGGCGA 
TAGAACAAAT TTGTCGTATT CCAAAGAATT AAATAATATA ATCAAATAGA 
TCAATCAACT TTTTTTTTCT TTCTGAGAAA AATGAACCGC AAGAATCCGA 
GTGGAGTTGT GCCATTCGCT GTTCTCCAAT CCAAATACGC CAAATCTTCC 
CAAAAATAAA GAAACCTTTC CTTTTTTTTC TCTTCACTCT GTTCCCATAT 
CTACAGNGAC TCTTCTCTCT CTGTATAT

3 prime edge [+] show sequence

Chromosome: 3; Position: 3535556 [Map]; Strand: c
- AT3G11280.1 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: -709; Region: promoter
- AT3G11280.2 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: -750; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
ACGAATGCTT TGAAGTTTAT TTCTCATCTG CAATAGAGAC AAGAGTAATT 
TCTTGCGACA AAAGTTAACC AGTAACTCTT ATAATATTTC GACTGTCATA 
AAATCTTTCA AGGAACCTAA TAATATAACA TCTCACACNT GTTCAAAAGA 
TAAATCAAGA GTTTTTAGCA TAATAAGACA TAAGCAGAAG AAGTTTGGGA 
GAATATGACG ATCTTAGGCA GCAATGGTAA GGCCACCAGA TCGAAGTCTA 
AGCAGCCAAG ACATTCTCAA ACTTGAGTTC TTCAACAGCA AGAAAATCTC 
TCTGTACTCT TTCTTCACAA ACAAATCCAA CGCAAACAAG TAAAGATCAC 
TACCTTGCTC AACCTCTTCC ATGGAGTCCA AACACTCAAT GCATTCCCCA 
ATGGTATACT CGTACTGCCT AACCGATGCA CTCACTGGAC TCTCCTTCAT 
CAGCTCAGTT TTTAACCTGT GGCATCCCGG AGTTACAATT TCAACATCTT 
GTAACCGAGA CTCTGCAAAA CCAACACTGT TAAATCTCCG GTGCTGCGGA 
GTAGGCTGCT CATCATCGTC ATCATTGTCA TCTTCATCAG CTCCACCTTC 
ACTTCCTGAG ACTGGCTCGT TTGTGTAAAG TGTTGATAAT GGAGTTGGGT 
CATGTAGCTG TGGTGATTCG GAATGATGAT CAAGCACTCT CCTGCGATAA 
GAACGGAAAT AGGCTTTTCC TGGTTCT

AT3G11280.1

Model type: Protein coding
Short Description: Duplicated homeodomain-like superfamily protein
Curator Summary: Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).
Computational Description: Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11280.2

Model type: Protein coding
Short Description: Duplicated homeodomain-like superfamily protein
Curator Summary: Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).
Computational Description: Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link: InterPro Scan - TAIR