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52-1085-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19584233 [Map]; Strand: w
      • AT2G47810.1 - [+] show detail - nuclear factor Y, subunit B5
        Distance: -615; Region: promoter
    Flanking Genome Sequence: 52-1085-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GTAGACCACA AGACGTGCTT TTATATGGTC CACGAGTTCG ATATTATCGT 
    TTATTAAAGT GACTAGCTCT TAAGGAGGAA TGTGGAATAA TTGAATAATT 
    TTTGGTTGAG AAGAGTTTCC AGACTAACTG GAGTGTGGAG TCAATCCACA 
    GATAGACNGG TATTGACTTA AGCAGGAGGA CCAAAACTTC CTTTTTAGGG 
    TAACATCAAG TACGTCATCA ACCCCAAACT ATTTTCGCCT TCACGTACGT 
    TGATGATATC ATATCATATT CATTCCCAAA GGCGAGATAA TTCACTACTA 
    AAGGAATGAT ATATGTGTTA TATATTCTTA ACACATTTCA ACATTATTTT 
    GTTTGCAACA CATCTTATTC TATGATTACA TTTTAATTGT TTTAACTCAA 
    CCAAAAGGGT TTAGGAGAAA ATAATTAGAA GAAAATTGAG AGAGAGAGAA 
    ATTAGCTAGA CCTGCCACAT TGTCTCCCCT GTGACCTAGA CCACTCTCAT 
    TGGTTTGTAT GACACGTCAC CACCATTCTC TGACCAGACA AACATAGATA 
    GATACTCCTT AATTAGCTCT CTTGCCTTTC TACTTATATA TAAAGCTAAT 
    TTAACTACAC AAATCTCTCT GTCAAAACGA ATATTTTTTT AGATGTATAC 
    ATAATAAACA CATTTATGTT AAAACCTCTC CTTTTTCTGT GTGCCATATA 
    GTTTGGCAAA TTACATATCT TCGT

AT2G47810.1

Model type
Protein coding
Short Description
nuclear factor Y, subunit B5
Computational Description
"nuclear factor Y, subunit B5" (NF-YB5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, intracellular; EXPRESSED IN: sepal, male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B3 (TAIR:AT4G14540.1); Has 1476 Blast hits to 1476 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 483; Fungi - 353; Plants - 526; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR