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52-1075-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1279698 [Map]; Strand: w
    Flanking Genome Sequence: 52-1075-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACCATTCATA ATCCTCGAGC GAGCTAACTG 
    CATTGCTTCA TTATGGCAAA ACAGAACCTA CGATCGTCTC AAACTCCATC 
    TACCTAAACA GTTTTGCCAA TTACCCAATT ATCCTTTCCC GGACGAGTTC 
    CCTGAGTACC CTACCAAGTT TCAGTTTATT CAGTACCTTG AGTCCTACGC 
    AGCCAACTTT GACATCAACC CTAAGTTCAA CGAGACAGTC CAGTCCGCTA 
    AATATGATGA GACGTTCGGG CTGTGGCGGG TTAAGACCAT TTCAAACATG 
    GGTCAGCTCG GTTCTTGCGA GTTTGAGTAT ATATGCAGAT GGATTGTGGT 
    GGCAACGGGA GAGAACGCTG AGAAAGTTGT GCCGGATTTT GAAGGTCTAG 
    AGGATTTTGG CGGCGATGTT CTCCATGCTG GTGACTATAA ATCCGGTGGA 
    AGGTACCAAG GGAAAAAGGT TTTGGTGGTG GGATGTGGAA ACTCCGGTAT 
    GGAAGTCTCT CTCGATCTCT ACAATCACGG AGCAAACCCA TCGATGGTCG 
    TTCGTAGCGC TGTAAGTACC AAAAGTCTTA AACCAAAAAA AAAAAAAAAG 
    NCCCNANNGN TNAANTTTTT TTNNCCCCNN AAAAAAANNC CCCNTNGNNN 
    NNGGNCCTTT TTNAAAAAAN NNNNTTTNNA AANCCCNGGN NNNTNNGNNC 
    CCTTTTNGGG NNNNANNGGG NNTTNNTTNA N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1279692 [Map]; Strand: w
    Flanking Genome Sequence: 52-1075-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CCCTTCACGT TTCAAGCCCG CAGCAACGGC TAGACCTGAT GGGCCAGCTC 
    CGACGATGAC GGGTCCATTG ACCCAGATGC AACGCCGGAA GAAAATGTCG 
    CTGCCTTCGG GGATGAGGTT TTGAAACATA CTCGTGATGT TGATAGACTT 
    CTTGTTATTA TTTCCATACA TCTTCCACAG AGTTTAGAGT TTGCTTGTCT 
    GGTTGTGAGG AGAAAACAGA AGAAATTTTA AGAATGTAGA AGAAGAAAAA 
    AGAAAGATGT TGGAAACTTT TTAAGACAAG AGGATGGAGA TGTAAGTGTA 
    TGTGTGTGTT CTGTTGGATT GGAGAAGGAG ATGTATAAAT AGAGAAGACG 
    ACTTGATGCA AATTGGTAAT TGTAAAATTA GTAAAAATAT TATTATTATA 
    TATTTAGCTT CTGAATGTTA TTTATATCTC AAATGATAAG CT

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR