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52-0728-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18477882 [Map]; Strand: w
      • AT2G44800.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 9331; Region: intergenic
      • AT2G44810.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: -1171; Region: intergenic
    Flanking Genome Sequence: 52-0728-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAGGAT 
    TACCTCCTAT ATTCCCACGC CCTTCTAGGC TTCTAGCATA TTGTTTTTAT 
    ACAATTAACG ACAAGTTTTA TGTCTACGTA TAAAAGCAAC ATATAACAAT 
    CTTAAAATTA GTTATCGACT TAGAATCTAA ATATAAAATG TAAGTGTAAA 
    TGATCATATC CAAATGAGCA GAGAATGGTT GAATGAATCC ATTGAATAAG 
    GCAGAATGAT CAAGATATGA AATGTCGCGA TGAAATTTAT CTTGCTAGCC 
    TATATCGCGG GTAACAGAAT AAGTCCAATT AAATTAGTTG GAGTGATGTG 
    TTGTTCGGGC AAAACGACGA ATAAAAGAAG TGCAACGTGA GTTACTTACT 
    ATTTGAATTT CACATCACAT GTNGTAGCTC TTTATATATT AGTCTTGTGC 
    TTTTTAATAA CATATAGCCT CTTTTCATTT ATAAATCCTA TTAGAGTCTT 
    AGCTGTTTTG CAATATTTTC TTTATATTGT ATTGATAACC ATCGTGATTT 
    CTGAAAGACT GTTTTAACTC TATATACTTT TAAGCATTTC ACATTATCAC 
    ATCGTTTGAA TGCATTTCAA ATGTTACCCA CGTGGGACAC TAGTAATAAA 
    AACACTTTTA GATTCTTGAT ATCTTACAGA ATATTATATG TTATATGCAG 
    TAAAAAGAAT TATGTAGACT ATGAACTAAC TTGAAGAAAG GAGTTTTAAT 
    TTACACGATA ACCATAAATA CTAAGGAGG

AT2G44800.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G60290.1); Has 8435 Blast hits to 8385 proteins in 967 species: Archae - 0; Bacteria - 1060; Metazoa - 91; Fungi - 1008; Plants - 4904; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44810.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Curator Summary
Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.
Computational Description
DEFECTIVE ANTHER DEHISCENCE 1 (DAD1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G16820.1); Has 1715 Blast hits to 1709 proteins in 324 species: Archae - 0; Bacteria - 331; Metazoa - 67; Fungi - 376; Plants - 633; Viruses - 9; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR