1. Home
  2. Mutant Lines
  3. 52-0645-1

52-0645-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1102204 [Map]; Strand: w
      • AT4G02500.1 - [+] show detail - UDP-xylosyltransferase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0645-1 - 5-prime edge
    CCTGTCGGTG ATCATTACCT CTTGAAATCG ATCAAGAACA AGATCGATTA 
    CTGTAGGTTA CATGGGATCG AGATCTTCTA CAACATGGCT CTTCTCGATG
    CAGAGATGGC TGGTTTTTGG GCAAAGCTTC CANCCCGNGC CGNNA
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1102088 [Map]; Strand: w
      • AT4G02500.1 - [+] show detail - UDP-xylosyltransferase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0645-1 - 3-prime edge
    CCGACAGGAT TCTCACATGG TTTTGGCGCC GAACCAGTCA CCAAAAGAAC 
    ACGTGGCTTG TTAGGTCCGA TGAAATTAGG GAAACTAGGG TTCTTAGCTA
    ACCAATCAGA TCTCTGCTCA TCCCAATCTG ATATCTTGGG TCCGAGGGTG
    TAAGGTTTAT TCGGGTCGGG TTTCTCTTCT TCACCTTCGT CAACGAATAT
    CTTGTTGATG TCAAACGTCT CGTAGTTATT ACTCCCACCG GAATTACCTC
    CACCGTCACC GGAAGAAGAA TCTCCTCCGG TCTGGATTTC TTCAAGGACA
    CGGTGAGGCT CACCTCGTTT GCGTGCGTGG AAATGTTGAC GGATCTCGTC
    AAGATCTTGC TCCGGAGTTC CGAATTTACC GGCGCCGATT GTGCTACGTA
    GGACAACAAC GGTAAGAAGA AGACAGAGAA TCGTTACCTT TAATTGGCGT
    AAAGCTCTTT GGATTCTCCG GCACCGGTAA GCTCCTAAAC ACCTCTCAAT
    CATCTTCTTT CTTCTTACAA GATTCTCTGT AAAAGATCTG TGCTTTATGT
    GTTTTTAAGA GAAGATCTGA GTTTCCATTA ATGTAAGAGA TTCGAATTTG
    ATAACACTGT TAATTACCAA AGTTACTTAC TACAACAAGA GAAGAGAAGC
    GAGGAGAGTT TTTGTGTTTT TGGACACGAC AGTTAAGATT GTCTGATTTC
    ACTTAATTGT CGGTGGTAGT GAT

AT4G02500.1

Model type
Protein coding
Short Description
UDP-xylosyltransferase 2
Curator Summary
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational Description
UDP-xylosyltransferase 2 (XT2); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xylosyltransferase 1 (TAIR:AT3G62720.2); Has 461 Blast hits to 460 proteins in 94 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 152; Plants - 284; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR