Home
Mutant Lines
52-0489-1

52-0489-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 921605 [Map]; Strand: w
  - AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
    Distance: 0; Region: exon11 (CDS)
Flanking Genome Sequence: 52-0489-1 - 5-prime edge
```
GTTCCGACGG GTTATATTAT CCGTCACTGC ACAAGCAAGT GAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 921489 [Map]; Strand: w
- AT5G03620.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
  Distance: 0; Region: exon11 (CDS)

GTCGGAACCT AACCCTCGCT TGATATTCTC ACAATTGTAT TCTTTCTTCG 
TAGTGTTGTT GCTGTTATCG CCGGTTAAAA GTCCGATGCT TGTGCTATTG 
TACCCTTCTT TACATAGGAA TCTTAGGTAT GCGTCCTCTG TGATGTCGTA 
GACTAGACCC GGGTGAATCG CTCTTCTCGG GTTAATTTGA CCCGACCCGT 
AACTTAATTC TGCTTCGTTG CCTTTGATTC TCATAGGAGT AGCTGTAAAG 
GAAGTGTAAA GATTGAAACT TTCTTTTACT TTTGAGAACG CTTTGAGCCT 
TTTTTGTTTG ATGATTTTAG TTACCTGTTG TCATAAGGGC GGATTTGATT 
GCGGCTGGAG ACCAATCAGG ATGGAATGAT TTGACATAAG CTGCTGCAGC 
TGCTGCGTGA GGACAAGCCA TTGACGTTCC TGACATTATG GAGAACAGTG 
TTCGTCTATT GTCGTCTGGA TAACCGGTTA CCGATGCTAG CTTCGAGTAT 
GCTGCGAGAA TGTTTAGTCC CGGCGCTGAT ATGTCAGGCT TGAGAATGTT 
GGGACTTATT CGTTGAGGTC CTCTTGCTGA GAAGGAAGAA ATCGATGGAG 
CTAACATTTT GGTTGTCTTT GTCTTAAAGA TAACCGCTTG AGGATTTCTG 
TGAAGTTCGA TAAGAGTTAG GAACAGCAAG AATAATAGAA GTAAGACATA 
GAGAGAAGAG ATTGATTGAT TTACTTGGTG GAGTTGATGT ATTN

AT5G03620.1

Model type: Protein coding
Short Description: Subtilisin-like serine endopeptidase family protein
Computational Description: Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: xylem serine peptidase 1 (TAIR:AT4G00230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR