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Mutant Lines
52-0410-1

52-0410-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 7946507 [Map]; Strand: w
- AT5G23575.1 - [+] show detail - Transmembrane CLPTM1 family protein
  Distance: 0; Region: exon1 (5UTR)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAG CTGCTTTTGA ATCCGCCGTA ACTAAAAACA 
ATCCTCCTTT TCTCGATTCG TTAAACTATG GCCCCGCCGG CAGGACAAAG 
GGCGGCGGTG GCTGAAGCGG CTGGCGCCGA TGGTGCTCCA CCGCAGCAGC 
AGCGTGGATT TGGTTCCACG ATTTCCGGCA TCGTTAGAAT CGCCGTCTTT 
TGGTATTTTG CTTCTAAGTT CTTTTCTCCT AAGCAGAAAC CTATGGATC

3 prime edge [+] show sequence

Chromosome: 5; Position: 7946449 [Map]; Strand: w
- AT5G23575.1 - [+] show detail - Transmembrane CLPTM1 family protein
  Distance: 0; Region: exon1 (5UTR)

GATGTGAATT CGCNGAAGGA GATTCTGAGA TTTGTAAAAG CAGAGAGAGT 
TCGATAGAGA GATATTTATG GGATTCTTTA TTTAATTTAT ATTTTTTGTA 
TAAAAATCTG AAAGAAGATT TGAATAAACA AAATATATAA CTGTGATGGA 
GTCGTGACGA TGCTCTTCCA ATGCGATTCA AGTAGAAGTG TTTTATGACA 
CCAACACGTC GCTTTAGACT TTAGAACAAA GTAACATTTG CATCTAAAGA 
CCTCTGTATT TTAGATATTT ACTATTATTG CCCGAACCTT TAGAAAATAA 
TATTTGTACC CATATATTTT GTAGATATAA AATTCTAAAA ACATGATTTT 
GATTTGCCGT NCTGTGATTC TCC

AT5G23575.1

Model type: Protein coding
Short Description: Transmembrane CLPTM1 family protein
Computational Description: Transmembrane CLPTM1 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Cleft lip and palate transmembrane 1 (InterPro:IPR008429); BEST Arabidopsis thaliana protein match is: Transmembrane CLPTM1 family protein (TAIR:AT5G08500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR