1. Home
  2. Mutant Lines
  3. 51-2577-1

51-2577-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6714540 [Map]; Strand: w
      • AT4G10955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon10 (CDS)
      • AT4G10960.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 5
        Distance: 0; Region: exon11 (3UTR)
      • AT4G10955.2 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 51-2577-1 - 5-prime edge 
    GGAGAATGAC CNNCAAGCCN AACACTACCA ACCACCAACC GAAGCAACAA 
    TGTTTCTCAC TGCTTGGATA GCTATCTCAA ACCGTGTTGT CGTGTGAAGC 
    CCGTTTCTAA TAACATGGAT GTCATGCTCG ATGTCACGGG AAATGGANTC 
    CACTTTTGTA ACCGTTCCTC TGAAAGCAAT CACAAAACGT GGACTAAATT 
    CCATTGATTT GACGGTTTGA GAGAGCTGTT GCGGCAGTTT GTACTCATAG 
    ATTCCTCCGA AGATAGAGTT ATCCGCGTCA TCGACAAACT TACGAATGAG 
    GCGG

AT4G10955.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1); Has 218 Blast hits to 217 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G10955.2

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1).
Link
InterPro Scan - TAIR

AT4G10960.1

Model type
Protein coding
Short Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Curator Summary
Encodes a protein with UDP-D-glucose 4-epimerase activity.
Computational Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 5 (UGE5); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, root, guard cell, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 2 (TAIR:AT4G23920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR