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16-1278-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23157161 [Map]; Strand: c
      • AT3G62610.1 - [+] show detail - myb domain protein 11
        Distance: 576; Region: intergenic
      • AT3G62620.3 - [+] show detail - sucrose-phosphatase-related
        Distance: -2615; Region: intergenic
    Flanking Genome Sequence: 16-1278-1 - 5-prime edge 
    CCTTGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TANNNGAGAG GANAAAGAAG ATAGAACAGA ACGGGCACAC 
    ATTTATTTTT TTGTTGAAAT TGAAAACCCA ATCACATGTT GCCACATCGA 
    CGGTTTTCTC AAATTCTCAA AACTCTCTCC AGAAAGCCGA CTCTCTTGAT 
    TTTTATCAGT TTTAATTTAT TTTTATTGTC ATTAAACAAG AGAGCCCAAC 
    AATTTTTTGA TTACATCCTC CCGTTGGAGA TGGTCTTATA ACCTTTAATC 
    AAAATTCAAA ACGTTCATTA ATTACCACTT TACCAGTGAA CATTTACACA 
    CAAAAAAGAG TTGTGGTTGA CGACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23157222 [Map]; Strand: c
      • AT3G62610.1 - [+] show detail - myb domain protein 11
        Distance: 637; Region: intergenic
      • AT3G62620.3 - [+] show detail - sucrose-phosphatase-related
        Distance: -2554; Region: intergenic
    Flanking Genome Sequence: 16-1278-1 - 3-prime edge 
    CCCAAACAAA ATTGACGAAA AGATGCAAAG CCCAATCATC GTTTCTTCTG 
    AAAACCTTTC GCATTTGATA TCTTTTCTTT GAAACTGAAA TCAAGATACA 
    CAAACTGAAA CCAATTTGTT CACCAAAAGA AAATAAAAAT GCGTGGGTTT 
    CGATTTCAAA GAGATTCAGG AAAAGATCTC CGATAGCTTT CGTCTATGGC 
    AACACTCTTT TCAATTCTGG GTTCGAGCTT CGTGGTTTTA AAAGCT

AT3G62610.1

Model type
Protein coding
Short Description
myb domain protein 11
Curator Summary
Member of the R2R3 factor gene family.
Computational Description
myb domain protein 11 (MYB11); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 8738 Blast hits to 8112 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 742; Fungi - 445; Plants - 5931; Viruses - 3; Other Eukaryotes - 1617 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62620.3

Model type
Protein coding
Short Description
sucrose-phosphatase-related
Computational Description
sucrose-phosphatase-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages.
Link
InterPro Scan - TAIR