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16-0490-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1103652 [Map]; Strand: c
      • AT4G02500.1 - [+] show detail - UDP-xylosyltransferase 2
        Distance: 42; Region: intergenic
      • AT4G02510.1 - [+] show detail - translocon at the outer envelope membrane of chloroplasts 159
        Distance: -1114; Region: intergenic
    Flanking Genome Sequence: 16-0490-1 - 5-prime edge
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCTAT GATATTTAGT TGATAGTCTT AGTTAAATAA
    GAAGAATCAG GTTAAAAAAA AAGTTCTTGA ATTAAATTAA CACAGATTAT
    TGATCCATGA AGCTACAAAA TCTCAAGTTC TAATGGATTA CAAAGAACAA
    AAAGGAAGAA AAACAACATT TTGATTTCGT AATAGAACTC TAGACGTAGA
    GACAAAGTAA AACCAAAGAA TAAACTGATG TCTCTGCACA ATACTTTATC
    ATCCATCTTA GTACAACAAC ATGCAAAGAC ACAAGACATA AAGATAGCGA
    GAAACATAAC ACAAATCCTA AACGCAGATC TGATTCAAAC TTGATTGGTT
    TGTACCTTAA CCGCCTTAAA CGCCGGATGA AGCAACCCGA GCTCGTCTTT
    CATCTCCAAC GGATTGCTAG TTTCGTTTCG CACTCTCTTG ACTTTACGAC
    TAGCCAAAGA TTTGTGAGTG AAACCATAGA TTTGCAGAAT CTGGTTATCT
    CCAAAGTTAA AGGCTCTGTC CATTTGTTTT AGACACCCGT TCAACCGGGT
    AATCACCCAA ATTTTCCACA CGGTTTGCAA CCGACAAAGT GAGTCACCAA
    TGGGCCATCT GTGATCGCCT AGACCCGGGN GATAGGTTTC TATCATTTCT
    TCATATCGGG NCCACAAGAA TCCCCCAGTA ACCGGGGAAG AAGGATCCAC
    TTTCTANGTA CNCCTATAAC AACANGNCGN TNGCTCAATG NGGTGCTCCA
    CAAATCCCAA CCAAG

AT4G02500.1

Model type
Protein coding
Short Description
UDP-xylosyltransferase 2
Curator Summary
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational Description
UDP-xylosyltransferase 2 (XT2); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xylosyltransferase 1 (TAIR:AT3G62720.2); Has 461 Blast hits to 460 proteins in 94 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 152; Plants - 284; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G02510.1

Model type
Protein coding
Short Description
translocon at the outer envelope membrane of chloroplasts 159
Curator Summary
An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.
Computational Description
translocon at the outer envelope membrane of chloroplasts 159 (TOC159); FUNCTIONS IN: transmembrane receptor activity, GTPase activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, cytosol, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: multimeric translocon complex in the outer envelope membrane 132 (TAIR:AT2G16640.1); Has 20720 Blast hits to 13966 proteins in 1613 species: Archae - 439; Bacteria - 5942; Metazoa - 6041; Fungi - 2379; Plants - 1534; Viruses - 151; Other Eukaryotes - 4234 (source: NCBI BLink).
Link
InterPro Scan - TAIR