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16-0428-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17952627 [Map]; Strand: c
      • AT4G38330.1 - [+] show detail - Integral membrane protein hemolysin-III homolog
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 16-0428-1 - 5-prime edge 
    TACAATGCAA TGGGGATCTT AAGCCCAAGT GACGTCGTTG AACAACAACA 
    CCTTTGGAGG AATCTAATCT AATCTATTGA AATCTCCTAA CTCGTGGGAG 
    CATCTCTCCA AAATAAACTA CTAATAGTAT GATTTCCAGA TTATGAATCC 
    TTCTTAGGCT AGAACAAAAT ATGGAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17952691 [Map]; Strand: c
      • AT4G38330.1 - [+] show detail - Integral membrane protein hemolysin-III homolog
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 16-0428-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGGCATTGTA TCTATCTGCT TACATCTGTA CTTGAGACTC AGCCTAATAC 
    TATTACCAAG TCCAGTGCAT TTTATGATAT CCCCCTTTTT TTAATATAGA 
    TATGAAGAGA TGAGATTTTT AAATTGCTAC AAAAGAGAGA GTCTACAATT 
    TCGCAATTAT CAACATAATT ATAGAGAGAG AGGCTTAAGA GAGGAGCATT 
    GTTGGATGTT TGATTAATGA TGATGATATG ACTACAACAA CAACAACAAA 
    AAAAAGTATG TGTGTATACG TGGACGATTA TTATTAGGTT GTTGACTTCA 
    GCTGTTTCCG TTTAGTTATT AAAGAGCTCC GTGATGTCAT CCAATTTCTT 
    TATTATATAC TATACACACT TTCTTATTTA TTTATCTAAA CTCATTTGCT 
    GTACAATTTT TTAANAAAAC TCCCATTACC TAGTTTTTAT CTTGTTAAAA 
    GACTTATCCC AACGTAATTT CAAAATTAGG ATTGTGGTTA ATGGATGCAC 
    ATATCTCACA AAGATTTGAA ATACGATTTT TATGANGCAT TATTTCAAGT 
    AAATTCATTN GATTTGTTTT ACTTATTAAG AGATTCCTTA CTACTCCGGA 
    CTNATTCGGA TAAANGGAAC ATCCATATNT GTATAATACA TATTTCNGGA 
    TCCTTTAATA NTGAGACTAA GATTAAAAAA ATTATTATTT NTAGNNCCTT 
    GGGCNTTAAT TTTTNTAATG AAACTAAGAT CNNGCNAGGT TN

AT4G38330.1

Model type
Protein coding
Short Description
Integral membrane protein hemolysin-III homolog
Computational Description
Integral membrane protein hemolysin-III homolog; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: Haemolysin-III related integral membrane protein (TAIR:AT4G38290.1); Has 8 Blast hits to 8 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR