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16-0352-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20469248 [Map]; Strand: c
      • AT5G50300.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: -1124; Region: intergenic
      • AT5G50310.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -5239; Region: intergenic
    Flanking Genome Sequence: 16-0352-1 - 5-prime edge 
    ACTAATGTTA CGTAATAATA TTTCACTTCA GTGGAGGATC GAACATCATT 
    TAGTAATTTT AGGACTAAAA TATAGAATGG CTTCTAAGAA TCATGTAAGC 
    TCTTGCTGAA CTAATAAAAT CGCCATTTTT AACAACCAAA TTAACTTCCG 
    GACTCTTGCA TAAACTAAGA CAATCTGTGA ATTGAATATG CAACATTAGG 
    TCAACTCACA AGTAGATACT ACATAGGATG TCCAACTAGG TGAGGTCAAG 
    GAGAATAACA CTAGTTGGAT TTTCTAGTTT ATGGCACTCC AATTCATCCG 
    GAAAGAGGAT GGTATATCAC CCCGAAGATT CTTTACTAAA ATATTTTATA 
    TCCAATGCAT ACTTTCTTTG ATACCAGACA ATTTTATGGA GTTAGAAAAA 
    GCATTAATGC AGAGAAACTT GAAGACCAAA ATCTTTTATG AAAGGAAAAA 
    AAAAAAAANN TTGGCNTGGA ANNANTNNCA NTAAAGGGGN AAGGTNNNNA 
    TCCAAAAAAA AAAAAAAGGG GGANNAGTNG GTTTTTTTNC CTTNNNCNAN 
    NNAANNNTTN NNNNNNNANN NNNANNNNTN NNNNNNTNAA ATAAAANNNT 
    TTTTTNNNCC CNGGGGNNTT TTTNNCCCNN NTTTNANNCN NAANNGTTTT 
    TNNNTNTTTT TTNGNNAAAA AAAAANNTTT TTTTTTNNGG GGGGGGGGAN 
    NNANTTTTTT TTNAAAAAAA ANGGGNNNTT TTTTTTNTNN NAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20469360 [Map]; Strand: c
      • AT5G50300.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: -1236; Region: intergenic
      • AT5G50310.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: -5127; Region: intergenic
    Flanking Genome Sequence: 16-0352-1 - 3-prime edge 
    ATTTACATTA GAGTATATTT ATCTTTCGTC TCCTACTCTT AATGTTAATT 
    CCTGAAAACA TTGATACCCG TATATAAGCT

AT5G50300.1

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Curator Summary
Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2).
Computational Description
AZA-GUANINE RESISTANT2 (AZG2); FUNCTIONS IN: transporter activity, purine transmembrane transporter activity; INVOLVED IN: transport, purine transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: AZA-guanine resistant1 (TAIR:AT3G10960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G50310.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR